AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nin6g00904 ATGGATGTGAAAGGATTGGGATCTTCAATGGAGTCGTTGATGTCTTCATTCAACGCTCGCATAGCTGAGCTTCAAGAGCTTTTCATCGCCCGAAACATGTATTCGTCGAGCGGAGTCGCGGATTTGTCGGAGGTGGATGCGACGTTGACGGCAATGGAGCAGCAAATCCAGCGTATCAAACAAAGGTTGCGAGAAGAAACCCTCGCCATTCCCAAAGCTAAAAAGTTGATTGAGGCATCGCTACAGCAGCAGAAGCAATTGCAGCATATGTCTGCGCATGTGCCTTCATATTTGTCTGAGAGGGATAAGTTCATGGATCATGATACCGGTGCCCACGCTGTGATAGAGGAAAGCATTAGACAGGATTATGCCCATGGGCTTCAGAAATTTGAGGAGGAGCCTGCACCATTACTCAAAGAGAAAAAGGGCCGTGCTTCTGCACCAATATGGTACATTACCGCTAATGAGCTGGACTCCTTGTCCTCGTACATGAAAGGAAGGCTCACTCTTGATAAAGTCAATGCAGCAATTAATGACATGGCTGCATATGCCGAAGCAAATTCCCAGCTTATGACAGCACCACGAAAGAAGTTGACAGAGGGTACCTTAGAGAAAGCACTGGAACTAAGAGAGATTGGAATGACAGAAGCAGTAAAGGGCAAACACTTTTTTCTGGAAAGTGATGTTAAGGGACCTGCATTAAAGCTTGATAATACTGGAAAAGCAATACTAACTGTTCTCCGTCACCTTGGCCGGATAAGTGAAACCCGAATTGGGCATCATCGCGTGTTCATCCTTTTAAGGCCTCAGTAG 813 46.25 MDVKGLGSSMESLMSSFNARIAELQELFIARNMYSSSGVADLSEVDATLTAMEQQIQRIKQRLREETLAIPKAKKLIEASLQQQKQLQHMSAHVPSYLSERDKFMDHDTGAHAVIEESIRQDYAHGLQKFEEEPAPLLKEKKGRASAPIWYITANELDSLSSYMKGRLTLDKVNAAINDMAAYAEANSQLMTAPRKKLTEGTLEKALELREIGMTEAVKGKHFFLESDVKGPALKLDNTGKAILTVLRHLGRISETRIGHHRVFILLRPQ 270
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nin6g00904 270 PANTHER SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 1 4 269 IPR009829 GO:0000278(PANTHER)|GO:0000940(PANTHER)|GO:0005876(PANTHER)|GO:0007059(InterPro)|GO:0007059(PANTHER)|GO:0008017(InterPro)|GO:0008017(PANTHER)|GO:0031110(PANTHER)|GO:0051301(InterPro)|GO:0051301(PANTHER)|GO:0072686(PANTHER)
Nin6g00904 270 Pfam Spindle and kinetochore-associated protein 1 20 260 IPR009829 GO:0007059(InterPro)|GO:0008017(InterPro)|GO:0051301(InterPro)
Nin6g00904 270 FunFam Spindle and kinetochore-associated protein 1 148 266 - -
Nin6g00904 270 Coils Coil 42 69 - -
Nin6g00904 270 Gene3D - 147 266 IPR042031 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nin6g00904 K26094 spindle and kinetochore-associated protein 1