Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nin6g00927 | ATGAAGTTCGGGAAGCGATTGAAGCAACAAATTCAAGAGACTTTGCCGGGTTGGCACGACAAGTATCTGGCTTATAAGGATTTGAAGAAGCTCGTGAAGTTGATCTCATCCGTGCCACGGCCATTGTTGGATCACGGATCGCTTGAGTACGGCGGATCAGAAGCCGAGTTTGTCTATTTATTGAACAATGAGATCGAGAAGTTTAACACATTTTTCGTGGAACAAGAAGAGGATTTCATTATCCGGCATAAGGAGTTACAACAGAGAATCAAGAGGGTGATGGAACAAAAGGGACCAAATGGGAATGAACCATCAGAAACAGATTTTGATGAGGAGATGGCTAAAATCAGAAAGGACATTGTAAATTTCCATGGTGAAATGGTTCTATTAGTCAATTACAGCAATATTAACTACACAGGGCTGGCTAAGATATTAAAGAAGTACGACAAGAGAACCGGGGGTTTGTTGCGTTTGCCCTTCATTCAGAAGGTGTTGGAACAACCATTTTTCACGACGGAGAACATATCGAAGATGGTAAGAGAGTGTGAGAGTACCCTAGACGAAGTGTTCCCGGAGGCGGTAGCCGAGGAGGAGGAGGAGAAAATTGGCGGCGATGGAGAGGGGAAAACGATGGTGGTGGGAGAAGGTATTTTCAGGAACACAGTGGCAGCGCTAATGACGATGAAAGAGATTAGGAACGGCAGCTCTACGTACAGCCATTTCTCTCTGCCGGTGCTCAATTTGCCTAATCCCGAGCTTATTCAGTCGTTTCAACTCAACTCGCCTATAGCGATTGTCTAA | 801 | 44.94 | MKFGKRLKQQIQETLPGWHDKYLAYKDLKKLVKLISSVPRPLLDHGSLEYGGSEAEFVYLLNNEIEKFNTFFVEQEEDFIIRHKELQQRIKRVMEQKGPNGNEPSETDFDEEMAKIRKDIVNFHGEMVLLVNYSNINYTGLAKILKKYDKRTGGLLRLPFIQKVLEQPFFTTENISKMVRECESTLDEVFPEAVAEEEEEKIGGDGEGKTMVVGEGIFRNTVAALMTMKEIRNGSSTYSHFSLPVLNLPNPELIQSFQLNSPIAIV | 266 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nin6g00927 | 266 | ProSiteProfiles | SPX domain profile. | 1 | 162 | IPR004331 | - | |
| Nin6g00927 | 266 | PANTHER | SPX DOMAIN-CONTAINING PROTEIN 3 | 1 | 250 | IPR031142 | GO:0016036(InterPro) | |
| Nin6g00927 | 266 | CDD | SPX-AtSPX1-like | 2 | 151 | - | - | |
| Nin6g00927 | 266 | Pfam | SPX domain | 1 | 36 | IPR004331 | - | |
| Nin6g00927 | 266 | Pfam | SPX domain | 114 | 163 | IPR004331 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nin6g00927 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nin | Nin-Chr3:31119525 | Nin6g00927 | Nin-Chr6:10922961 | dispersed | |
| Nin | Nin-Chr4:6697023 | Nin6g00927 | Nin-Chr6:10922961 | dispersed | |
| Nin | Nin-Chr6:10922961 | Nin5g02125 | Nin-Chr5:42971104 | transposed |