AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nin6g00946 ATGGCTCTGTCTTCTTCAAATGCTATATCTCCAAGAAAGCTAAGATATGATGTGTTTTCATACTCCTACCAAAATGACTCAAAAACCCCTTTGGTGATCTCTGTTCTTGCCTCCCTCATTGAAAGAACCCTGGCTAGGAATGAGAGGATTGCTAGAAACTGCACAATCCCCCTGTCCAAGGGCTCCAAAACCCGGGTTTTCGATTGCCACGAAACCCCGGACATGACCATTCAATCCTACCTCGAGAGGATTTTTCGTTACACCCGAGCCGGGCCGTCGGTATATGTCGTCGCCTATGTCTATATCGACCGATTCTGCCACTCCCACCCCGATTTCAGAATAAGTGCCCGGAATGTCCATAGGCTTCTCATTACAACCATCATGGTCGCTTCTAAATATGTGGAAGACATGAATTATAGGAACTCATATTTTGCTAGAGTTGGAGGGATCACAACTAAGGAAATGAACAACTTGGAGCTTGAATTCTTGTTTTTGATGAATTTTAGAATGCATGTGAATGTGAGTGTGTTCGAGAGCTATTGTTGCCACTTAGAGCGGGAAGTGAGTATCGGTGGCGGATACCATATCGAGAAAACGCTCCGGTGCGCCGAAGAAATCAAATCGCAACAGCGGGATGAAACAAGATACGATCGAATCGCTCGAATTACATAG 672 45.24 MALSSSNAISPRKLRYDVFSYSYQNDSKTPLVISVLASLIERTLARNERIARNCTIPLSKGSKTRVFDCHETPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCHSHPDFRISARNVHRLLITTIMVASKYVEDMNYRNSYFARVGGITTKEMNNLELEFLFLMNFRMHVNVSVFESYCCHLEREVSIGGGYHIEKTLRCAEEIKSQQRDETRYDRIARIT 223
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nin6g00946 223 Gene3D - 19 221 - -
Nin6g00946 223 PIRSF PREG 6 220 IPR012389 -
Nin6g00946 223 Pfam Cyclin 33 169 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Nin6g00946 223 SUPERFAMILY Cyclin-like 79 171 IPR036915 -
Nin6g00946 223 CDD CYCLIN-AtCycU-like 63 188 - -
Nin6g00946 223 PANTHER UNCHARACTERIZED 23 206 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nin6g00946 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nin Nin-Chr6:11121373 Nin6g01106 Nin-Chr6:14626138 dispersed