Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nin6g00951 | ATGGCATCATCGCCGGAGAAAAATTCACAGTTGCCGCCGGTGAACAAACCGGCAAGTTGGCCGGAGTTATGGTTGAACAAAGATCAACAAGCACTTAAGAATGTGATTCGGAAAATGCGGCGTCAGTCTCTGTCAAGTTCCAATACCCCCCCTTCTGATTGTGATGAAACCCTAAATTCGACCCCAACTGAGAAAAATTTAGGAAACCCATGTGGGAAAGATTATACTTCGGTGATTTCGGATCAAATTCTCGCCACTGTGCTGTCGAAGCTTCCGAAATCCGAGCGAATTCAGAATTCTTTGGTTTGTAAACGGTGGTGTAGGGTTCTTGGGGGCTTGGTTGATTGTATTAGGGTTTTAGATTGGGATTTTCTTGAATCGGGTAGGCTTGTTTATCGATTTCCGAACCTTGCTGACGTGGATATTGTTCAAGCTTGTTTGTTGACGCAGAGGAATTCTGGGGTTGTGTTGAGTAATCGATTAGTGGCAGTTCGAATCCCTTCGGTTTCGTCTGATTCTGGGTTCATTAGGAAATACGATTTGTTGAGTTCTGATGTGATTGATAGAGGGATTCAGATTCTTGTTCAAGGGTGTAAGAATTTGAGGAAACTTGTGTTGATTGGTGCGAGTGAAGAAGGGTTGTCTAGTGTTGCAGCTGAGTGTTTGACCTTGCAGGAACTGGAGCTGCATTCTTGTGGTGACTCTGATTTGAGAGGGATTGTGGGTTGCCAGAACTTACAGATTCTGAAACTCATTGGGTGCACTGGTGGGTTTTATGATTCTGTGATTTCGGATATTGGGTTGACCATTTTGGCTCAAGGGTGTAGGAGGTTAGTGAAGCTTGAGTTGGTTGGTTGTGAGGGAAGCTATGATGGAATCAAGGCTATTGGTCAATGCTGCTTAATGCTGGAGGAAGTGACAATCTGTGATCATAGGTTTGAAGGTGGATGGTTATCAGCGCTGTCGTTTTGTTGGAATTTGAAAACCTTGAAGCTTCGGTCTTGCAAGAGTATTGATTCTAGTCCAGGACCCAGTGAGCATTTGGGTTCTTGTCCTGCCCTTGAAGAATTACATTTGCAGAGGTGTCAATTGCGGGATAAAGAGGGTGTAGGGGCACTATTTTTAGTTTGTGAGGCTGTTAGAGAGCTCGTTTTTGAGGACTGTTGGGGATTGGACAATGCCATATTTAGCACTGCAGTTGTTTGTAGGAGAGTGACGTATCTGTCTTTGGAAGGATGCTCATTACTTACAATGGATGGTTTAGAGCCGGTTGTTCTTTCTTGGAAAGAGCTCAAGAGGCTTAAAGTAGTCTCATGTAACAATATAAAGGACAGTGACATTACTCCAGAATTAGCAACCTTATTTTCTGTTCTTAAGGAGTTGAAATGGAGACCAGATTCCAAGTCTCTGCTGTCGTCAGGTCTTGCTGGTACTGGAGTATGGCAGAAAGGTGGAGTTTTCAACCGGAAGTAA | 1473 | 43.92 | MASSPEKNSQLPPVNKPASWPELWLNKDQQALKNVIRKMRRQSLSSSNTPPSDCDETLNSTPTEKNLGNPCGKDYTSVISDQILATVLSKLPKSERIQNSLVCKRWCRVLGGLVDCIRVLDWDFLESGRLVYRFPNLADVDIVQACLLTQRNSGVVLSNRLVAVRIPSVSSDSGFIRKYDLLSSDVIDRGIQILVQGCKNLRKLVLIGASEEGLSSVAAECLTLQELELHSCGDSDLRGIVGCQNLQILKLIGCTGGFYDSVISDIGLTILAQGCRRLVKLELVGCEGSYDGIKAIGQCCLMLEEVTICDHRFEGGWLSALSFCWNLKTLKLRSCKSIDSSPGPSEHLGSCPALEELHLQRCQLRDKEGVGALFLVCEAVRELVFEDCWGLDNAIFSTAVVCRRVTYLSLEGCSLLTMDGLEPVVLSWKELKRLKVVSCNNIKDSDITPELATLFSVLKELKWRPDSKSLLSSGLAGTGVWQKGGVFNRK | 490 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nin6g00951 | 490 | SUPERFAMILY | F-box domain | 65 | 110 | IPR036047 | GO:0005515(InterPro) | |
| Nin6g00951 | 490 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Nin6g00951 | 490 | FunFam | Uncharacterized protein | 257 | 346 | - | - | |
| Nin6g00951 | 490 | MobiDBLite | consensus disorder prediction | 38 | 67 | - | - | |
| Nin6g00951 | 490 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Nin6g00951 | 490 | Gene3D | Ribonuclease Inhibitor | 313 | 372 | IPR032675 | - | |
| Nin6g00951 | 490 | Gene3D | Ribonuclease Inhibitor | 373 | 465 | IPR032675 | - | |
| Nin6g00951 | 490 | Gene3D | Ribonuclease Inhibitor | 75 | 312 | IPR032675 | - | |
| Nin6g00951 | 490 | SMART | LRR-CC-2 | 275 | 299 | IPR006553 | - | |
| Nin6g00951 | 490 | SMART | LRR-CC-2 | 351 | 376 | IPR006553 | - | |
| Nin6g00951 | 490 | SMART | LRR-CC-2 | 402 | 427 | IPR006553 | - | |
| Nin6g00951 | 490 | SMART | LRR-CC-2 | 243 | 274 | IPR006553 | - | |
| Nin6g00951 | 490 | SUPERFAMILY | L domain-like | 157 | 451 | - | - | |
| Nin6g00951 | 490 | PANTHER | UNCHARACTERIZED | 84 | 458 | - | GO:0019005(PANTHER)|GO:0031146(PANTHER) | |
| Nin6g00951 | 490 | MobiDBLite | consensus disorder prediction | 39 | 67 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nin6g00951 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nin | Nin-Chr6:11297604 | Nin9g02294 | Nin-Chr9:34660921 | dispersed | |
| Nin | Nin-Chr6:11297604 | Nin4g00316 | Nin-Chr4:2945944 | transposed |