AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nin6g00976 ATGGCAGAAGGGTCTTATGTGAAGCTTACCAAGGCACAAGCCTCATTGCAGGATGTTGAGCCTGGAGAGCTTAATCAACCCATAGATGTTCATCAGTTAACTGCTCGTAGATGCGAAGCGTGTAAGCAGATATTGCCTCCCCATTACGAACCCCCGGCCGATGAAGATTGGACGACCGGAATATGCGCTTGCAGCAACGATCCCCAAAGTTGTTGGACCGGACTTTTTTGTCCGTGTATTCAGTTTGGTCGAAATATCGAGGGCTTAGACGAAGGTATTAGTTACAGAAGCGCTTGTGTCGCTCATGTGATATGCGTTGAAGGTGGGTTGACGCTTGCCGCTGCTACGGCATTGTTACACGGCATTGATCCCAACACGCAATGTCTCATAACGGAAGGCCTTTTGTTTGCTTGGTGGATGTGTGGCATTTACACCGGCTTGGCTCGACAAGCCGTGCAGAGAAAATACCATCTCAAGGACTCGCCTTGTGATCCGTGTCTGACTCATTGCACGATGCATTCGTGTGCTCTATGTCAAGAGCATAGGGAAATGAAGAGTCGCCTAGAGGATCAGAATGTTGAAATGACCATGGTAGATGCTCCAAGCGTTCAAGAAATGAACAATATTACCAAAGAAGAGAATCTAGACGAAGACACTTCGACTTCGAATAACTTACAAATTCAGGCTTTGTAA 693 47.04 MAEGSYVKLTKAQASLQDVEPGELNQPIDVHQLTARRCEACKQILPPHYEPPADEDWTTGICACSNDPQSCWTGLFCPCIQFGRNIEGLDEGISYRSACVAHVICVEGGLTLAAATALLHGIDPNTQCLITEGLLFAWWMCGIYTGLARQAVQRKYHLKDSPCDPCLTHCTMHSCALCQEHREMKSRLEDQNVEMTMVDAPSVQEMNNITKEENLDEDTSTSNNLQIQAL 230
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nin6g00976 230 NCBIfam PCR-CNR family Cys-rich domain 56 185 IPR006461 -
Nin6g00976 230 Pfam PLAC8 family 57 183 IPR006461 -
Nin6g00976 230 PANTHER DUF614 FAMILY PROTEIN-RELATED 54 192 IPR006461 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nin6g00976 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nin Nin-Chr6:11734997 Nin9g02305 Nin-Chr9:34727522 dispersed