Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Nin6g01068	ATGGTGGCTGCTTCAGCTAACGGAGACATGATTGAACCCTCCCCATCTCCGACCAAATCACCCTCAACTCGTCCCTCCGATTCTACCTCGGAATCTCCGTCCTCCAACAATCGGCCCGATCCACCGTCCGATTACTCCAACAACAACTCTGCACCTAGTCCTTCCCGACAAGTTGAATTCCAGCCGTCGTTAAGGAGCGAGGAATATAGGCAGCTGTTTCGTCTCCCACCTGAAGAAGTTCTCATTCAAGATTTTAATTGTGCATTGCAAGAAAATTTTCTCCTTCAGGGTCACATGTATCTGTTTGTCCATTACATCTGCTTTTATTCCAACCTATTTGGATTTGAGACAAAGAAAGTGATACCCTTTCAAGATGTCACATCTGTAAAAAGAGCGAAGACTGCAGGAATATTCCCTACAGCCATAGAATTAGTGGCCGCAGGAAAGAAGTTCTTCTTTTCGTCTTTTCTTTCACGTGATGAAGCTCTTAAGCTTATCAATGATGGTTGGTTGGAACATGGAAATGGAGCCCAAGCTATATCTGAGCAGCAGGACTCGAAATCCGAGTTGAATGGCCAAGACCCTGGAAATGCTGGACTTGAAAGATTAAATGGCACCAAACAAATTGTGGGTGATCAAGAAGTTATAAACAGCAAAAAGGATGATCTGGTATCAGAGGATTCTGAAGCCTCACCCAGTGGCCAAGCTGAAGTGTCATTGGCATCCTCAAGAGTGGAAGATATTGAGGAAGATGATGTAGTTCTTGTTCAAAATGCTGACGGTTTATCTTCTGTAAAATCTCCAATAAGGGAGATGGAAGAAGCTGATGCACCTGATGTCCCTGAAGATTATACCTTGGCCGCTGAATCAGAGTTTCCGATAAAGGTGGAGGAATTCTTTAATCACTTTTTCTCGGATGATGCTATCCATTTTCTTGAATCGTTTCGCAAAAAATGTAGAGATAAAGATCTTAAAAGCACTTCATGGAAGCCCCATAGTGAATTCGGTCATGCTCGTGAAGTGTCATTTCAGCATCCGATAAAAATTTATTTGGGGGCAAAATTTGGTAGCTGCAAGGAGCTACAGACATATCAAATTTACAGAAACAGTCATCTGGTTCTTAAGACTTCACAAGAGATCAATGACGTGCCATACGGGGACTATTTCACTGTAGAGGGGCTTTGGGATGTGAAGAGAAATGACAATGGCTGCAAATTAAGGGTATATGTGTATGTTGCTTTTTCTAAGAAAACAATGTGGAAAGGGAAGATTGTGCAGGCTACTCTTGAAGAGTGTCGAGATGCTTATGCAAGCTGGATAGAATTGGCACATGAACTTTTGAAGCAGAAGAACATTGAAAAGGAAGTGAATTTGATTTCAGATACTCAAGTACATAATGAGGCACAAGACGTAACCGAGGAATGTTTAGAACGACCCCATGCGGAAGTTGATATGTCATTGTCACAAACACTGTCAGATTCGAACAATATTGGCCAAGTCAGTCCCTCATTACAAGAAAATCCAAGAGGTGGTTCAGTTGCATCGTTTATCTGGGAAAGCATTATGACGTCTGTTTCATCTTTAAAGTCTCAATGCAAGGTGCCTTCCTTTGTAGTTATCATTCTTGCCTTGGTCATCCTTCTGATGCAGATAAGCATAGTCGTCTTATTACTAAAACCTCAGTCCGTCCAAGTGATTTCTGAATCAGAATGGATGCGAAACATACACAGTGAAAGAAGGGTCGAGACATTATCATTGCTTGATAAACAGATTAACCATCTTAAGGAAGAAATGCTTATTGTCGAGACCCTGCTTGAAAAGATGCGACATGAACATGAAATGTTGACGTTACAACTGAAAAACCTGATGCTGCTCCAAAAGTAG	1884	41.77	MVAASANGDMIEPSPSPTKSPSTRPSDSTSESPSSNNRPDPPSDYSNNNSAPSPSRQVEFQPSLRSEEYRQLFRLPPEEVLIQDFNCALQENFLLQGHMYLFVHYICFYSNLFGFETKKVIPFQDVTSVKRAKTAGIFPTAIELVAAGKKFFFSSFLSRDEALKLINDGWLEHGNGAQAISEQQDSKSELNGQDPGNAGLERLNGTKQIVGDQEVINSKKDDLVSEDSEASPSGQAEVSLASSRVEDIEEDDVVLVQNADGLSSVKSPIREMEEADAPDVPEDYTLAAESEFPIKVEEFFNHFFSDDAIHFLESFRKKCRDKDLKSTSWKPHSEFGHAREVSFQHPIKIYLGAKFGSCKELQTYQIYRNSHLVLKTSQEINDVPYGDYFTVEGLWDVKRNDNGCKLRVYVYVAFSKKTMWKGKIVQATLEECRDAYASWIELAHELLKQKNIEKEVNLISDTQVHNEAQDVTEECLERPHAEVDMSLSQTLSDSNNIGQVSPSLQENPRGGSVASFIWESIMTSVSSLKSQCKVPSFVVIILALVILLMQISIVVLLLKPQSVQVISESEWMRNIHSERRVETLSLLDKQINHLKEEMLIVETLLEKMRHEHEMLTLQLKNLMLLQK	627

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Nin6g01068	627	MobiDBLite	consensus disorder prediction	221	244	-	-
	Nin6g01068	627	Pfam	GRAM domain	69	170	IPR004182	-
	Nin6g01068	627	Coils	Coil	591	625	-	-
	Nin6g01068	627	CDD	PH-GRAM-GRAMDC	77	170	-	-
	Nin6g01068	627	Gene3D	-	65	172	IPR011993	-
	Nin6g01068	627	PANTHER	PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC	5	623	-	GO:0043069(PANTHER)
	Nin6g01068	627	MobiDBLite	consensus disorder prediction	11	62	-	-
	Nin6g01068	627	Pfam	VAD1 Analog of StAR-related lipid transfer domain	287	430	IPR031968	-
	Nin6g01068	627	ProSiteProfiles	VASt domain profile.	283	451	IPR031968	-
	Nin6g01068	627	SMART	gram2001c	67	133	IPR004182	-
	Nin6g01068	627	MobiDBLite	consensus disorder prediction	1	62	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Nin6g01068	K27900	vascular associated death 1, chloroplastic

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Nin	Nin-Chr6:13588304	Nin6g02974	Nin-Chr6:46064213	dispersed