AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nin7g01316 ATGACCAATTTCCGATCACCCATTCTTCTGCTTCTTCTTCTTCTTCTTGTTGAAGCATCACTATATCTCGTATCTGGGTCGAACCAGTTTTGTGAATCAGGGTTTGACTTTTGTGATGCTGAGAGTGATAGCTCATCAAGGATACTGATTAAGGGTGGGACAGTTGTTAATGCTCATCATCAGGAGCTTGCTGATGTGTACATAGAGGATGGGATCGTTGTTGCTGTAAAGCCTAATATCAAGGTCGCAGATGGAGTCAAAATTCTCGATGCAACGGGAAAGTTTGTCATGCCTGGTGGAATTGATCCTCATACCCACTTGGCCATGGAGTTCATGGGTTCTGAGACTATCGATAACTTCTTCAGTGGCCAAGCTGCTGCATTAGCCGGTGGAACAACAATGCACATTGATTTTGTTCTCCCTGTAAGTGGAAGCTTAACTGCAGGTTTTGATGCCTATAAAGAAAAGGCAAAGATTTCGTGCATGGATTATGGTTTTCACATGGCAATCACAAAATGGGATGAAGTTGTTGCAAGAGAGATGGAAATTATGGTTAACGATAAAGGTATCAACTCCTTCAAATTTTTCATGGCATACAAGGGCTCGTTTATGGTCAATGATGATCTTCTGTTAGAGGGTTTCAAAAAGTGCAAGTCTCTAGGTGCCTTGCCTATGGTTCATGCAGAAAACGGAGATGCTGTTTTTGAAGGGCAGAAAAGAATGATTGAACTTGGAATAACTGGTCCAGAAGGACATGCACTTTCAAGGCCTCCAGTGTTGGAAGCAGAAGCTACAGCTCGAGCAATCCGCTTGGCTCGTTTCGTGAACACACCTTTGTATGTTGTGCATGTCATGAGCTCTGATGCAATGGAAGAGATAGCCAGAGCTCAAAAGTCAGGACAAAGCGTTATTGGAGAACCAGTCGTTTCAGGCCTAGTCCTTGATGATTCAGGCCTTTGGGATCCTGACTTCATAACAGCGGCAAAGCAAGTTTGTGATGAGTCCCCCATCCGAGCAAAAGGACATAGCAAAGCTCTTCAAGCAGCACTATCAACAGGAGTTCTAAAGCTGGTAGGAACTGATCACTGCACCTTCAATTCTACACAGAAATCTCTTGGAATTGACGATTTCCGTAAAATACCAAATGGGGTCAATGGTATTGAGGAGAGGATGCATCTGACTTGGGACACGATGGTGGAATCAGGCCAAATATCTGTCACTGATTATGTCCGGATTACAAGCACGGAATGTGCAAAAATATTTAACATATATCCAAGAAAAGGAGCTATTCTTGCTGGATCTGATGCAGATATAATCATATTTAATCCGAATGCAAGCTTTGAGATAAGTGCTCGTGTTCATCACTCTAGATCAGACACAAACGTTTACGAGGGAAGACGTGGCAAGGGGAAAGTTGAAGTAACAATATCTGGTGGAAAGATTGTTTGGGAAAACGATGAGTTGAAGGTTGTTCCCGGTGTTGGCAAGTACGTGGAAATGCCACCTTTCAATTATCTTTTTCATGGAATAGAGAAAGCAGATGCAAACTACATTTCTTCTCTTAGAGCTCCGGTAAGACGATCCAGAGCCACATTGTGA 1599 42.96 MTNFRSPILLLLLLLLVEASLYLVSGSNQFCESGFDFCDAESDSSSRILIKGGTVVNAHHQELADVYIEDGIVVAVKPNIKVADGVKILDATGKFVMPGGIDPHTHLAMEFMGSETIDNFFSGQAAALAGGTTMHIDFVLPVSGSLTAGFDAYKEKAKISCMDYGFHMAITKWDEVVAREMEIMVNDKGINSFKFFMAYKGSFMVNDDLLLEGFKKCKSLGALPMVHAENGDAVFEGQKRMIELGITGPEGHALSRPPVLEAEATARAIRLARFVNTPLYVVHVMSSDAMEEIARAQKSGQSVIGEPVVSGLVLDDSGLWDPDFITAAKQVCDESPIRAKGHSKALQAALSTGVLKLVGTDHCTFNSTQKSLGIDDFRKIPNGVNGIEERMHLTWDTMVESGQISVTDYVRITSTECAKIFNIYPRKGAILAGSDADIIIFNPNASFEISARVHHSRSDTNVYEGRRGKGKVEVTISGGKIVWENDELKVVPGVGKYVEMPPFNYLFHGIEKADANYISSLRAPVRRSRATL 532
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nin7g01316 532 FunFam Dihydropyrimidinase like 3 99 469 - -
Nin7g01316 532 SUPERFAMILY Composite domain of metallo-dependent hydrolases 47 499 IPR011059 GO:0016810(InterPro)
Nin7g01316 532 CDD D-HYD 48 495 IPR011778 GO:0005737(InterPro)
Nin7g01316 532 NCBIfam dihydropyrimidinase 48 499 IPR011778 GO:0005737(InterPro)
Nin7g01316 532 PANTHER HYDRANTOINASE-DIHYDROPYRIMIDINASE FAMILY MEMBER 43 516 IPR050378 GO:0004157(PANTHER)|GO:0006208(PANTHER)
Nin7g01316 532 Pfam Amidohydrolase family 95 482 IPR006680 GO:0016787(InterPro)
Nin7g01316 532 SUPERFAMILY Metallo-dependent hydrolases 99 428 IPR032466 -
Nin7g01316 532 Gene3D Urease, subunit C, domain 1 47 511 IPR011059 GO:0016810(InterPro)
Nin7g01316 532 Gene3D - 99 469 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nin7g01316 K01464 dihydropyrimidinase [EC:3.5.2.2]