AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nin7g02119 ATGGCGAGAAAACCTCTCCTAAATCTCCTCCTCTTCTTCTCACTCTCTCTCCTCGCAGTTTCCGCCGCCGACGTACCCACCGTCTACGAGATCCTCCCTAAATTCGGTCTTCCGAGCGGTCTCTTGCCGGATTCCGTCAAGTCTTACTCTCTCTCCGAGGACGGAAGTTTCGTCGTCGAATTGGAGAAAGCTTGTTACATCAAGTTCGATTACCTCGTTTGGTACGACAAAAAGATCACCGGTAAGCTAAAGGTTGGGTCGATTAGTGATTTGAAAGGGATTGAGGTGCAGAAATTTTTTATTTGGCTCAACGTCGATGAAATCAAGGT 329 47.72 MARKPLLNLLLFFSLSLLAVSAADVPTVYEILPKFGLPSGLLPDSVKSYSLSEDGSFVVELEKACYIKFDYLVWYDKKITGKLKVGSISDLKGIEVQKFFIWLNVDEIK 109
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nin7g02119 109 PANTHER T31J12.3 PROTEIN-RELATED 21 109 IPR007493 -
Nin7g02119 109 SUPERFAMILY At5g01610-like 9 108 IPR036758 -
Nin7g02119 109 Pfam Protein of unknown function, DUF538 28 109 IPR007493 -
Nin7g02119 109 Gene3D - 16 109 IPR036758 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nin7g02119 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nin Nin-Chr7:38128969 Nin7g02141 Nin-Chr7:38383871 dispersed
Nin Nin-Chr7:38128969 Nin7g02120 Nin-Chr7:38140343 tandem