AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nin7g02529 ATGTGTGCGCGTTTGGAGAATTCTCACTGGGATGCCAAAAACTTGTGTGCATCTGATATATATAAGCTTGTATGCATCTACACGCCCGGGGAACAAAGGTCGATCATTTATGCGGCATGTCTTGAAGGTTCTGATCCTGTTCGACTGTTTGAGAAGCGAATTAATGCAAGACGAGAAATAGGATACGAATTTGATAAAGCATCATTGACGGAATATAATCATATGAGCTTTGGGGGACCCCCTGTTACCACTGACAATGCTGAAGAAGCTGACGAGCTTCTCCGCATGGATGAGAAAGCATCTGAAATTGAAGCAGAAGTCCTTTCAGCTCCTCCAAAGTTGGTGTATAGTAAACTAATCTTGCGCTTCACGAGGAAGCTTCTAGTCGCAGTTACAGAGAAGTGGGACAGTCACGTGCCTGCCATTGAGAAAATTGCACCCTTTAACTGGAAGAATGAACCAGCAGGGAGGATCTTGGAGCTGTCTATTCTTCACCTGGCCATGGCTGAAATAACTGTGCTAGGAACACGACACCAAATAGTAATTAACGAGGCGGTCGATCTTGCAAAACGGTTCTGTGATGGAGCAGCGCCTCGTGTGATCAACGGCTGCCTCAGGACCTTTGTTAAGGATCTTAAAGAAATCCCTGTTGCACCAAATTTGGAAACCAAAAGTAGACAGTCCACTTAA 690 45.07 MCARLENSHWDAKNLCASDIYKLVCIYTPGEQRSIIYAACLEGSDPVRLFEKRINARREIGYEFDKASLTEYNHMSFGGPPVTTDNAEEADELLRMDEKASEIEAEVLSAPPKLVYSKLILRFTRKLLVAVTEKWDSHVPAIEKIAPFNWKNEPAGRILELSILHLAMAEITVLGTRHQIVINEAVDLAKRFCDGAAPRVINGCLRTFVKDLKEIPVAPNLETKSRQST 229
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nin7g02529 229 Coils Coil 86 106 - -
Nin7g02529 229 Gene3D - 33 218 IPR035926 -
Nin7g02529 229 SUPERFAMILY NusB-like 116 213 IPR035926 -
Nin7g02529 229 Pfam NusB family 149 210 IPR006027 GO:0003723(InterPro)|GO:0006355(InterPro)
Nin7g02529 229 PANTHER N UTILIZATION SUBSTANCE PROTEIN B-RELATED 34 215 IPR011605 GO:0006353(InterPro)|GO:0009507(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nin7g02529 - -