AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nin9g02229 ATGGCGAAACTGATTGAGTTGCTCTCTTGTATGCTTCAAAGAATGGCGGACTCGAATGATCTGAAATGTCTTCGGCTGGATATCGAGAAGAACTCGGCGTTCCATGCATTGATCAGACCTAACATTTCGATTCGGAGCTACCTCGAGAGGATCTTCAAGTACGCGAATTGTAGCCCGGCTTGTTTTATCGTGGCGTATGTTTATCTTGACCGGTTTTCGAGGAGACATCCGATGTTTCCGATCAATTCGTATAATGTTCATCGGTTGCTCATCACCAGCGTCTTGGTTTCTGTCAAGTTCATGGATGATATATTTTACAACAACGCTTACTACGCTAGAGTTGGAGGAATAAGCACAGTAGAGATGAACATTCTAGAAGTGGACTTCTTATTTGGGCTGGGCTTCCAGCTAAATGTGACCCCAAACACATTCCACAATTACTACAGTTTTCTTCAAGCAGAGATGTTAATGGGCTACGCTCCTCTGCACACAATTCCATCTCTTCTCCCCTGCTCCAACTCTGAAGATGAGCCCACTATTCATCAACAACAATTGGCTGTTTGA 564 44.15 MAKLIELLSCMLQRMADSNDLKCLRLDIEKNSAFHALIRPNISIRSYLERIFKYANCSPACFIVAYVYLDRFSRRHPMFPINSYNVHRLLITSVLVSVKFMDDIFYNNAYYARVGGISTVEMNILEVDFLFGLGFQLNVTPNTFHNYYSFLQAEMLMGYAPLHTIPSLLPCSNSEDEPTIHQQQLAV 187
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nin9g02229 187 Gene3D - 1 184 - -
Nin9g02229 187 PANTHER UNCHARACTERIZED 3 171 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Nin9g02229 187 SUPERFAMILY Cyclin-like 46 138 IPR036915 -
Nin9g02229 187 PIRSF PREG 1 186 IPR012389 -
Nin9g02229 187 Pfam Cyclin 28 137 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nin9g02229 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nin Nin-Chr6:14626138 Nin9g02229 Nin-Chr9:34052059 dispersed