AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nin9g02296 GATGGAAATTCCGGTGGGGTTTTGGTCTCTCATGAATTCGGGTCTTTTCGTGTTGATTCATATTCCGAAACATGCCTTCACGGCTCCAACTTTTTACATCTAACTGAAATCGATTCCGGGTTGAAGCTTTTGGCTAGTGGGTATCCCAATTTGAGGAAACTTGTTGCTGTTAATTCCAGTGAAATGGGGTTGCTGAGTGTGGCTGAGGAATGCCCGACATTGTTGGAGTTGGTACTACATTGTTGTAACGATCAGACTCTGCGTGGGATCGCGGCGTTTCAGAATCTTCAGGTGTTGAAATTGGTGGGAAATGTTGAGGGGTTTTACAGCTCTTTGGTTTCGGATATAGGTTTGACCATTTTGGCGCAAGGTTGTAAGAGGTTGGTGAAGCTTGAGCTCAGAGGATGTGAGGGGAGTTATGATGGGATCAAGGCTATTGGGCAGTGCTGTCAAATGCTTGAAGAGCTGACTTTTTGTGATCATAGAATGGATGATGGGTGGTTATCTGCTCTCTCCTTCTGCGAAAATTTGAAAACTTTGAGGTTCGTTTCGTGTAAAGCCATTGATCGAAGCCCTGGACTGGATGAGCACTTGGGGTTTTGTCGGACACTCGAGAGATTACAGTTGGAGAAGTGTCAATTGAGAGAAAAATCATCTATCAGGGCTTTGTTTCTTGTTTGTCAAGCGATAAAGGAGATTGTTGTCGAGAATTGTTGGGGCTTGACTGATTCGATTTTCAGCAATGCAAGTCTATGCAGGTACTCTTTTATTAGCTTCTACTGA 783 44.06 DGNSGGVLVSHEFGSFRVDSYSETCLHGSNFLHLTEIDSGLKLLASGYPNLRKLVAVNSSEMGLLSVAEECPTLLELVLHCCNDQTLRGIAAFQNLQVLKLVGNVEGFYSSLVSDIGLTILAQGCKRLVKLELRGCEGSYDGIKAIGQCCQMLEELTFCDHRMDDGWLSALSFCENLKTLRFVSCKAIDRSPGLDEHLGFCRTLERLQLEKCQLREKSSIRALFLVCQAIKEIVVENCWGLTDSIFSNASLCRYSFISFY 260
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nin9g02296 260 SUPERFAMILY RNI-like 39 104 - -
Nin9g02296 260 Gene3D Ribonuclease Inhibitor 14 255 IPR032675 -
Nin9g02296 260 PANTHER UNCHARACTERIZED 37 252 - GO:0019005(PANTHER)|GO:0031146(PANTHER)
Nin9g02296 260 FunFam Uncharacterized protein 107 195 - -
Nin9g02296 260 SUPERFAMILY RNI-like 111 252 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nin9g02296 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nin Nin-Chr9:34661628 Nin4g00316 Nin-Chr4:2945944 dispersed
Nin Nin-Chr9:34660921 Nin9g02296 Nin-Chr9:34661628 proximal