AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nin9g02297 ATGAAGAAGGAGAAAGGAGTTTCAATTGCGAATCCTATCGAAGAATCTGGATTAAATCTTCATCGTAATCATCACCAAGAAGATGATGATAAACTTCAGGAATTCTCATCATCTATCTCCACTCGAAATGGTTCCTCCAAATACGACTTTGTCAAGGTTAAAGTATGGTTGGGTGATAATGCCGATCACTATTATGTCCTCTCTAGATTTTTGCTCAGCAGAATGTTGACTGTTACTAAGATCCCTAATCATGTGGCTCTGAAAATTGCTCTTGAACTCAAGAAGCTGCTCATAGATAATAGTCTTCTTGATGTCTCTCAGTATGACCTGGAAGCTAATCTGTTTAAGCTCATGGAGCGGCGAGGCTATGGAGAAGAGTATATAAATCGATATAAGATGATGACAAGATTTCACCATCAAAGAGTACCATTGGTTATTCTTGTGTGTGGTACAGCATGCGTTGGAAAGTCTACCATTGCTACCCAACTTGCACAGAGGCTTAACTTGCCAAACGTCTTGCAGACAGATATGGTATATGAGTTGCTAAGGACCTCAACAGATGCACCCCTGGCATCTTCACCTGCATGGGCACGTGAGTTCGGCTCTTCAGAGGAACTGATAACCGAATTTTGTAGAGAATGCAGAATAGTTCGCAAAGGTTTGGCTGGTGATTTAAAGAAAGCAATGAAAGATGGAAAACCAATAATCATTGAGGGGATGCATTTGGATCCAAGCATATACCTTATGGATGATGAGAACAAATCACCAAATAACATGACAGCAAAAATTGAAGAACCAGCGAGTGTGAAAACAGATAAAAAAGATGCAACAGATGGTCAACAAAGTGCCGAGCAAATGAAGTCAGAAGAAGTTATATCTGCTGAAGACTTGACTAAAGTTTCAGATGGCCTTAAATCCACCCTCATCATAAAAGGTGTTTCTGAAAATGAAAATCACGACAATCTAGATCCAGTGGCAGATAAAACTCCTCCCCTCAGAAGAGAAAAATCTGGTGCCACCAACCCAGTAATCGTTCCTATAGTCCTTAAGATGGCTGAATTTGATCACAAGGCATTACTGGAGGAGTGGATATCTAGTCGTACATTTAGTGACAAATTCCCAGTTCAGGAAAAAGATAAGCTGATTAACAACTTAAAAATCATACAGGACTATCTATGTTCATTCAAGTCACAGGGTCTAACAGTTGCTAACATATCTGCTACCACATTTCCGCAAACGCTAGATTGGCTGCACGGTTATCTTCTTCAGTGTATTGAGCAAGGAATATCACCTGTTTCCACTGTAAGCAGTGGGCAGCCAGCATGA 1326 40.42 MKKEKGVSIANPIEESGLNLHRNHHQEDDDKLQEFSSSISTRNGSSKYDFVKVKVWLGDNADHYYVLSRFLLSRMLTVTKIPNHVALKIALELKKLLIDNSLLDVSQYDLEANLFKLMERRGYGEEYINRYKMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNLPNVLQTDMVYELLRTSTDAPLASSPAWAREFGSSEELITEFCRECRIVRKGLAGDLKKAMKDGKPIIIEGMHLDPSIYLMDDENKSPNNMTAKIEEPASVKTDKKDATDGQQSAEQMKSEEVISAEDLTKVSDGLKSTLIIKGVSENENHDNLDPVADKTPPLRREKSGATNPVIVPIVLKMAEFDHKALLEEWISSRTFSDKFPVQEKDKLINNLKIIQDYLCSFKSQGLTVANISATTFPQTLDWLHGYLLQCIEQGISPVSTVSSGQPA 441
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nin9g02297 441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 249 IPR027417 -
Nin9g02297 441 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 31 428 - -
Nin9g02297 441 Gene3D - 141 249 IPR027417 -
Nin9g02297 441 Pfam AAA domain 146 244 - -
Nin9g02297 441 MobiDBLite consensus disorder prediction 266 280 - -
Nin9g02297 441 MobiDBLite consensus disorder prediction 262 289 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nin9g02297 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nin Nin-Chr9:34664843 Nin9g02325 Nin-Chr9:34932544 dispersed