AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nin9g02305 ATGACGGCTTCCCCCATATCTAGAAACAAACTCCGTTCAATTTCTTCTTCCCCCAAAAACCCAACCCCCGAATTCACCGGGTTTGACTCAAATACTGGAAATTCACCTACATTTTCACTCTTCCGCTTCAAAATCTCCCAAACTCGATCGGAGATGGCGGATGGAGGAGCTTCTCGATATGTCAAGTTGACGAAAGATCAGGCCCCCGTTGACGTCCGCCCCGGTGAACTTAATCAGCCAATTGATGTTCCTCAGTTAAATGTCCGCAGGTGCAATGAATGTGGACAACCTTTACCTGAAAGTTTTGAACCTCCTGCAGATGAACCTTGGACAACCGGGATATTTGGTTGTGCTGAAGATACACAAAGTTGCTGGACGGGACTGTTTTGCCCTTGTGTCCTGTTTGGACGTAATGTTGAAAGTTTGCGAGATGATGATACCCCTTGGACCAGTCCATGTGTTTGCCATGCCATATTTGTTGAGGGTGGTATGGCATTAGCAGCAGCCACAGCTTTGTTCCATGGTATTGATCCCAGGACATCGTTTCTCATCTTTGAAGGTTTATTATTTAGTTGGTGGATGTGTGGCATTTACACTGGCATTGTTCGACAAACGCTACAGAAGAAATATCATCTCAAGAACTCACCATGCGATCCATGTATGGTGCACTGCTGCATGCACTGGTGTGCTCTCTGCCAAGAACACAGGGAAATGAAGGGACGCCTCTCAGATAATGTCGTGATGCCAATGACCCTTGTCAATGCTCCACCCGTTCAAGAAATGAATGCTGATAGTGACAATAGGGATTCTGCACCAGCCCCTGTCAATGGGGGTGGCGTTACAACCATACAACTACTGCTATCGGAATGTGATGTGTTACTGAGACAATTAGATGTTACTGCTATGGTGGCAGATGCGTTGCTGTAA 927 46.49 MTASPISRNKLRSISSSPKNPTPEFTGFDSNTGNSPTFSLFRFKISQTRSEMADGGASRYVKLTKDQAPVDVRPGELNQPIDVPQLNVRRCNECGQPLPESFEPPADEPWTTGIFGCAEDTQSCWTGLFCPCVLFGRNVESLRDDDTPWTSPCVCHAIFVEGGMALAAATALFHGIDPRTSFLIFEGLLFSWWMCGIYTGIVRQTLQKKYHLKNSPCDPCMVHCCMHWCALCQEHREMKGRLSDNVVMPMTLVNAPPVQEMNADSDNRDSAPAPVNGGGVTTIQLLLSECDVLLRQLDVTAMVADALL 308
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nin9g02305 308 Pfam PLAC8 family 110 237 IPR006461 -
Nin9g02305 308 NCBIfam PCR-CNR family Cys-rich domain 109 239 IPR006461 -
Nin9g02305 308 MobiDBLite consensus disorder prediction 1 35 - -
Nin9g02305 308 PANTHER DUF614 FAMILY PROTEIN-RELATED 107 242 IPR006461 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nin9g02305 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Nin Nin-Chr6:11734997 Nin9g02305 Nin-Chr9:34727522 dispersed