Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nin9g02309 | ATGATGGTGGATCTGGGATCATTCTCCGACGAGAAATTCGACCCCAAGAAATGGATAAACGCCGCCTGCGAATCACGCCACCCTGAAGATCCGGTCGATAATCACCTTGTGGATCTGGAGATGAAACTGCAAATGATGTCGGAAGAGATCGCCGCCTCTCTCGAGGAGCAGAGCGCCGCCGCTATCCTCCGTGTTCCTCGAGCCACTCGCGACGTCATTCGCCTCCGCGACGATGCCCTGTCTCTCCGCCAATCTGTCACTTCCATCCTCCTCAAGCTCAAAAAGGCAGAGGGATCATCAGCGGAATCAATAGCTACTCTCGCCAAAGTCGATACCGTCAAGAGAAGAATGGAAGCGGCATATGAGACACTTCAGGATGCTGCTGGATTGACTCAATTAAGTTCAACAGTGGAAGATGTTTTTGCCAGTGGTGATCTTCCTAAGGCGGCTGAAACGTTGGCCAACATGAGGCATTGCTTGACTGCTGTTGGAGAGGTTGCTGAATTTGCTAATATTAGAAAGCAGCTTGAAGTCTTAGAAGACAGGCTGGACTCTATGGTCCAGCCTCGTTTAACTGACGCATTAACTAATCGCAAGGATAATGTTGCACAAGATTTGCGTGGAATCCTTCTTCGGATTGGGAGATTTAAGTCCCTGGAGCTGCATTATACCAAAGTTCATTTAAAACCAATAAAGCAGCTTTGGGAAGATTTTGACTCAAGGCAACAACGTAATAAGCCTGCAGGCGAGAGGAATCAAGTTGAAAAGAATTCAAGTAGCCAAGATTATCAATCGCAAACAGTTCTGTTCTCCAGTTGGTTGCCAAGTTTCTATGATGAATTGTTAATGTATCTTGAACAAGAATGGAAATGGTCAATGCTTGCTTTCCCGGAGGATTACAAGATTCTTGTCCCCAAGTTATTAATTGAAGCCATGGTCGCTGTGGGTGCCAGCTTTGTGTCCCGAATTAATCTAGCAACTGGTGATGTTGTTGCTGAAACAAAGGCATTGGGTAAAGGTATCTTAGATATCTTATCTGGAGATATGCAGAAGGGTATCAAAGTCCAAACCAAGCATTTGGAGGCCCTAATAGATTTACACAACATGACTGGAAGTTTTGCAAGAAATGTTCAGCACCTTTTTGCAGAATCAGATCTTCAAGTTTTAATGGACACGCTCAAGGCAATTTATCTTCCATACGAATCATTCAAACAAAGGTATGGACAAATGGAGCGTATTACCCTCTCTGCTGAGATTGCAGGGATTGACCTTAGAGGAGCTGTTACTCGTGGCCTTGGTGCGCAAGGAATCGAACTCAGTGAAACAGTTAGAAGGATGGAAGAGTCAGTACCACAAGTAATTGTACTCCTTGAAGCAGCAGTTGAGAGATGCATCAACCTGACTGGCGGTTCCGAAGCTGACGAACTAGTACTTGCCCTAGATGATGTTATGATACAGTACATTTCAACCCTTCAAGAAATCCTTAGATCTCTAAGAGTTGTATGTGGAGTGGATGTCAATGCAGATGGTGTTGGTTCAAAGAAAGAATCAGGTTTGGAGAAACGGGAAGGAGCTGCGCATACACGTAAACTTGAGTTGTCAAATGAGGAAGAGTGGTCTTATGTCCAAAGCGCATTGCAGATTCTTACAGTTGCAGATTGCTTGTCAAGCAGATCTGCTGTTTTTGAAGCTTCTTTGAGAGCTACTCTTGCTAGATTGAGCACAAACCTATCAAATTCAGTATTTGGTTCTAGTATCGACCAAAAACAGTCCCATGGAAGCAATGATGATGCGGGTGGTGATCTGTTTACGGATGGAAGGGCTGCGTTGGATGTGGTTGCATTAAGGCTCATTGATGCTCCGGAGAAGGCTCGAAAACTCTTTAATCTTTTAGAGCAGTCAAAGGATCCACGCTTTCATGCACTCCCAGTTGCATCTCAAAGAGTTTCAGCATTTGCCGATACAGTGAATGATCTAGTGTATGACGTCCTCATATCCAAAGTAAGACAACGGTTTAGTGAGCTATCTCGTATGCCTATCTGGTCAGCAGTAGAGGAACCAAGTGCTTTCCACCTCCCCACCTTTAGCGCATACCCGCAATCCTATGTCACCAGTGTTGGTGAATATCTTCTTACTTTACCCCAGCAGTTAGAGCCACTGGCCGAGGGCATTTCTAACAATGATTCCAACGCCGACGAATCCCAGTTTTTCGCAACAGAATGGATGTTCAAGGTTGCAGAAGGTGCTACTGCCCTATACATGGAACAGTTGAGGGGGATCCAGTTTATAACAGACCGCGGAGCACAACAGCTATCTGTGGATATCGAGTACTTGAGTAATGTGCTTTCTGCACTATCAATGCCAGTCCCTCCTATCCTCGCTACATTCCACATATGCCTCTCGACTCCAAGAGACCAACTAAAGGATCTCTTAAAACCCGACTCAGGGAACCAACTGGATCTACCCACTGCCAACCTTGTCTGCAAAATGCGACGTGTAAATCTGGAATAG | 2511 | 45.36 | MMVDLGSFSDEKFDPKKWINAACESRHPEDPVDNHLVDLEMKLQMMSEEIAASLEEQSAAAILRVPRATRDVIRLRDDALSLRQSVTSILLKLKKAEGSSAESIATLAKVDTVKRRMEAAYETLQDAAGLTQLSSTVEDVFASGDLPKAAETLANMRHCLTAVGEVAEFANIRKQLEVLEDRLDSMVQPRLTDALTNRKDNVAQDLRGILLRIGRFKSLELHYTKVHLKPIKQLWEDFDSRQQRNKPAGERNQVEKNSSSQDYQSQTVLFSSWLPSFYDELLMYLEQEWKWSMLAFPEDYKILVPKLLIEAMVAVGASFVSRINLATGDVVAETKALGKGILDILSGDMQKGIKVQTKHLEALIDLHNMTGSFARNVQHLFAESDLQVLMDTLKAIYLPYESFKQRYGQMERITLSAEIAGIDLRGAVTRGLGAQGIELSETVRRMEESVPQVIVLLEAAVERCINLTGGSEADELVLALDDVMIQYISTLQEILRSLRVVCGVDVNADGVGSKKESGLEKREGAAHTRKLELSNEEEWSYVQSALQILTVADCLSSRSAVFEASLRATLARLSTNLSNSVFGSSIDQKQSHGSNDDAGGDLFTDGRAALDVVALRLIDAPEKARKLFNLLEQSKDPRFHALPVASQRVSAFADTVNDLVYDVLISKVRQRFSELSRMPIWSAVEEPSAFHLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISNNDSNADESQFFATEWMFKVAEGATALYMEQLRGIQFITDRGAQQLSVDIEYLSNVLSALSMPVPPILATFHICLSTPRDQLKDLLKPDSGNQLDLPTANLVCKMRRVNLE | 836 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nin9g02309 | 836 | Pfam | Golgi complex component 7 (COG7) | 4 | 832 | IPR019335 | GO:0006886(InterPro)|GO:0017119(InterPro) | |
| Nin9g02309 | 836 | PANTHER | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 | 2 | 835 | IPR019335 | GO:0006886(InterPro)|GO:0006890(PANTHER)|GO:0007030(PANTHER)|GO:0017119(PANTHER)|GO:0017119(InterPro) | |
| Nin9g02309 | 836 | Coils | Coil | 36 | 56 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nin9g02309 | K20294 | conserved oligomeric Golgi complex subunit 7 |