AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Nin9g02309 ATGATGGTGGATCTGGGATCATTCTCCGACGAGAAATTCGACCCCAAGAAATGGATAAACGCCGCCTGCGAATCACGCCACCCTGAAGATCCGGTCGATAATCACCTTGTGGATCTGGAGATGAAACTGCAAATGATGTCGGAAGAGATCGCCGCCTCTCTCGAGGAGCAGAGCGCCGCCGCTATCCTCCGTGTTCCTCGAGCCACTCGCGACGTCATTCGCCTCCGCGACGATGCCCTGTCTCTCCGCCAATCTGTCACTTCCATCCTCCTCAAGCTCAAAAAGGCAGAGGGATCATCAGCGGAATCAATAGCTACTCTCGCCAAAGTCGATACCGTCAAGAGAAGAATGGAAGCGGCATATGAGACACTTCAGGATGCTGCTGGATTGACTCAATTAAGTTCAACAGTGGAAGATGTTTTTGCCAGTGGTGATCTTCCTAAGGCGGCTGAAACGTTGGCCAACATGAGGCATTGCTTGACTGCTGTTGGAGAGGTTGCTGAATTTGCTAATATTAGAAAGCAGCTTGAAGTCTTAGAAGACAGGCTGGACTCTATGGTCCAGCCTCGTTTAACTGACGCATTAACTAATCGCAAGGATAATGTTGCACAAGATTTGCGTGGAATCCTTCTTCGGATTGGGAGATTTAAGTCCCTGGAGCTGCATTATACCAAAGTTCATTTAAAACCAATAAAGCAGCTTTGGGAAGATTTTGACTCAAGGCAACAACGTAATAAGCCTGCAGGCGAGAGGAATCAAGTTGAAAAGAATTCAAGTAGCCAAGATTATCAATCGCAAACAGTTCTGTTCTCCAGTTGGTTGCCAAGTTTCTATGATGAATTGTTAATGTATCTTGAACAAGAATGGAAATGGTCAATGCTTGCTTTCCCGGAGGATTACAAGATTCTTGTCCCCAAGTTATTAATTGAAGCCATGGTCGCTGTGGGTGCCAGCTTTGTGTCCCGAATTAATCTAGCAACTGGTGATGTTGTTGCTGAAACAAAGGCATTGGGTAAAGGTATCTTAGATATCTTATCTGGAGATATGCAGAAGGGTATCAAAGTCCAAACCAAGCATTTGGAGGCCCTAATAGATTTACACAACATGACTGGAAGTTTTGCAAGAAATGTTCAGCACCTTTTTGCAGAATCAGATCTTCAAGTTTTAATGGACACGCTCAAGGCAATTTATCTTCCATACGAATCATTCAAACAAAGGTATGGACAAATGGAGCGTATTACCCTCTCTGCTGAGATTGCAGGGATTGACCTTAGAGGAGCTGTTACTCGTGGCCTTGGTGCGCAAGGAATCGAACTCAGTGAAACAGTTAGAAGGATGGAAGAGTCAGTACCACAAGTAATTGTACTCCTTGAAGCAGCAGTTGAGAGATGCATCAACCTGACTGGCGGTTCCGAAGCTGACGAACTAGTACTTGCCCTAGATGATGTTATGATACAGTACATTTCAACCCTTCAAGAAATCCTTAGATCTCTAAGAGTTGTATGTGGAGTGGATGTCAATGCAGATGGTGTTGGTTCAAAGAAAGAATCAGGTTTGGAGAAACGGGAAGGAGCTGCGCATACACGTAAACTTGAGTTGTCAAATGAGGAAGAGTGGTCTTATGTCCAAAGCGCATTGCAGATTCTTACAGTTGCAGATTGCTTGTCAAGCAGATCTGCTGTTTTTGAAGCTTCTTTGAGAGCTACTCTTGCTAGATTGAGCACAAACCTATCAAATTCAGTATTTGGTTCTAGTATCGACCAAAAACAGTCCCATGGAAGCAATGATGATGCGGGTGGTGATCTGTTTACGGATGGAAGGGCTGCGTTGGATGTGGTTGCATTAAGGCTCATTGATGCTCCGGAGAAGGCTCGAAAACTCTTTAATCTTTTAGAGCAGTCAAAGGATCCACGCTTTCATGCACTCCCAGTTGCATCTCAAAGAGTTTCAGCATTTGCCGATACAGTGAATGATCTAGTGTATGACGTCCTCATATCCAAAGTAAGACAACGGTTTAGTGAGCTATCTCGTATGCCTATCTGGTCAGCAGTAGAGGAACCAAGTGCTTTCCACCTCCCCACCTTTAGCGCATACCCGCAATCCTATGTCACCAGTGTTGGTGAATATCTTCTTACTTTACCCCAGCAGTTAGAGCCACTGGCCGAGGGCATTTCTAACAATGATTCCAACGCCGACGAATCCCAGTTTTTCGCAACAGAATGGATGTTCAAGGTTGCAGAAGGTGCTACTGCCCTATACATGGAACAGTTGAGGGGGATCCAGTTTATAACAGACCGCGGAGCACAACAGCTATCTGTGGATATCGAGTACTTGAGTAATGTGCTTTCTGCACTATCAATGCCAGTCCCTCCTATCCTCGCTACATTCCACATATGCCTCTCGACTCCAAGAGACCAACTAAAGGATCTCTTAAAACCCGACTCAGGGAACCAACTGGATCTACCCACTGCCAACCTTGTCTGCAAAATGCGACGTGTAAATCTGGAATAG 2511 45.36 MMVDLGSFSDEKFDPKKWINAACESRHPEDPVDNHLVDLEMKLQMMSEEIAASLEEQSAAAILRVPRATRDVIRLRDDALSLRQSVTSILLKLKKAEGSSAESIATLAKVDTVKRRMEAAYETLQDAAGLTQLSSTVEDVFASGDLPKAAETLANMRHCLTAVGEVAEFANIRKQLEVLEDRLDSMVQPRLTDALTNRKDNVAQDLRGILLRIGRFKSLELHYTKVHLKPIKQLWEDFDSRQQRNKPAGERNQVEKNSSSQDYQSQTVLFSSWLPSFYDELLMYLEQEWKWSMLAFPEDYKILVPKLLIEAMVAVGASFVSRINLATGDVVAETKALGKGILDILSGDMQKGIKVQTKHLEALIDLHNMTGSFARNVQHLFAESDLQVLMDTLKAIYLPYESFKQRYGQMERITLSAEIAGIDLRGAVTRGLGAQGIELSETVRRMEESVPQVIVLLEAAVERCINLTGGSEADELVLALDDVMIQYISTLQEILRSLRVVCGVDVNADGVGSKKESGLEKREGAAHTRKLELSNEEEWSYVQSALQILTVADCLSSRSAVFEASLRATLARLSTNLSNSVFGSSIDQKQSHGSNDDAGGDLFTDGRAALDVVALRLIDAPEKARKLFNLLEQSKDPRFHALPVASQRVSAFADTVNDLVYDVLISKVRQRFSELSRMPIWSAVEEPSAFHLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISNNDSNADESQFFATEWMFKVAEGATALYMEQLRGIQFITDRGAQQLSVDIEYLSNVLSALSMPVPPILATFHICLSTPRDQLKDLLKPDSGNQLDLPTANLVCKMRRVNLE 836
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Nin9g02309 836 Pfam Golgi complex component 7 (COG7) 4 832 IPR019335 GO:0006886(InterPro)|GO:0017119(InterPro)
Nin9g02309 836 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 2 835 IPR019335 GO:0006886(InterPro)|GO:0006890(PANTHER)|GO:0007030(PANTHER)|GO:0017119(PANTHER)|GO:0017119(InterPro)
Nin9g02309 836 Coils Coil 36 56 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Nin9g02309 K20294 conserved oligomeric Golgi complex subunit 7