Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Nin9g02322 | ATGTTGTCATTTTTGTCGAGGAATTTCTTGTATCTGCTGATACTCTGTTCTGGGTTTTGTTCGGCGGCGGACCCGTTTGCTAATTTCGAACTGGAATTCTCGTACATCACTGCTTCCCCTCTCGGTGTTCCTCAACAGGTTATAGCAGTTAATGGAAAGTTTCCAGGTCCAACGCTTAATGTTACTACTAATTACAATGTTGTTGTCAATGTCAAAAACAAATTGGACGAGAGCCTTCTCGTTACATGGCCTGGAATAGAAATGCGCCGTTCTTCTTGGCAAGATGGAGTTCTTGGCACTAATTGCCCCATTCCTTCAAAGTGGAACTGGACCTACCAGTTTCAGGTCAAGGATCAGATTGGCAGCTACTATTATTACCCGTCTCTGAATTTTCAGAGAGCAGCAGGTGGTTTTGGTGGCTTTGTCATCACCAACCGCAATATTATTAAGCTGCCTTTTGCTATGCCTGATGGAGATATAGTCATTACCATTGGTGATTGGTATACACGGAATCATTCGGCACTGAGGGCAAGTCTTGATGCTGGAAAGGAACTGGGCATGCCAGATGGAGTTCTCATTAATGGAAAGGGACCTTACCAATATAACTCCACAATTGTTCCAGATGGCATTAGTTATGAGACCATTAATGTCGATCCAGGCAAAACTTATCGAATCCGTGTGCACAATGTTGGAGTCTCGACTGCTTTGAATTTCCGAATTCAGAGCCATAATTTGCTTTTGGCAGAAGCAGAGGGACACTATACGTCGCAGCAAAATTATAGTAGCTTAGATATCCATGTTGGGCAGTCTTATTCTTTTTTGGTTACCATGGATCAGAATGCCAGTAGTGATTACTACATTGTTGCAAGTGCGAGACTTGTGAATGAATCACTTTGGCAAAGAGTTACAGGTGTTGCTGTTTTGCACTATTCGAATTCGAAAGGGAAAGCATTCGGCCCTCTCCCTGACCCTCCAAATGATTTCTACGACACTTCGTTTGTAATAAATCAGGCTATGTCAATCAGGATGAATAATTCGGCAAGTGGTGCACGTCCTAACCCACAAGGTTCCTTCCATTATGGTTCTATCAATGTCACCGATGTCTACACATTGAGGAGTATGCCACCCCAGATGATCAGTGGGAAATTTCGCGCAACTTTTAATGGGATCTCATTCATTAATCCTGACACACCAGTGAGACTAGCGGACAAATTCAAAGTGAAGGGTGCTTATAAACTTGACTTCCCAAATAAACCACTTCATTCTCCACCCCGGATGGACAGGTCTCTTATTAATGCTACCTATAAAGGATTTGCGGAAATCATATTGCAGAACAATGACACGGTAGCCCAGAGCTTTCACATGGACGGTTATTCTTTTTTTGTAGTTGGGATGGCTTATGGGGAGTGGACAGAGAACAGCCGGGGATCTTATAACCGGTGGGATGCAATAGCTCGTTCCACTACGCAGGTTTTCCCTGGAGGGTGGACAGCGATTTTAGTTTATCTGGATAACGTTGGAGCGTGGAACCTTAGGGCAGTAAACCTGGACAGATGGTATCTCGGCCAAGAAACATACATGAGAATCATCAATCCTGAGGACGATAGCCAGAAAACAGAACTCGCTGTGCCTGATAATGCCTTATATTGTGGTGCTCTCAGCTACATGCAAAAGCCACAAAAAACATCATCGGCATTTTCAATTGCTCATGGATTCTCAAGGCTGAATCATATGATCCTGATGGCATTTGTTGCCGGCTTGCTGCTGTTTTCATAA | 1776 | 43.69 | MLSFLSRNFLYLLILCSGFCSAADPFANFELEFSYITASPLGVPQQVIAVNGKFPGPTLNVTTNYNVVVNVKNKLDESLLVTWPGIEMRRSSWQDGVLGTNCPIPSKWNWTYQFQVKDQIGSYYYYPSLNFQRAAGGFGGFVITNRNIIKLPFAMPDGDIVITIGDWYTRNHSALRASLDAGKELGMPDGVLINGKGPYQYNSTIVPDGISYETINVDPGKTYRIRVHNVGVSTALNFRIQSHNLLLAEAEGHYTSQQNYSSLDIHVGQSYSFLVTMDQNASSDYYIVASARLVNESLWQRVTGVAVLHYSNSKGKAFGPLPDPPNDFYDTSFVINQAMSIRMNNSASGARPNPQGSFHYGSINVTDVYTLRSMPPQMISGKFRATFNGISFINPDTPVRLADKFKVKGAYKLDFPNKPLHSPPRMDRSLINATYKGFAEIILQNNDTVAQSFHMDGYSFFVVGMAYGEWTENSRGSYNRWDAIARSTTQVFPGGWTAILVYLDNVGAWNLRAVNLDRWYLGQETYMRIINPEDDSQKTELAVPDNALYCGALSYMQKPQKTSSAFSIAHGFSRLNHMILMAFVAGLLLFS | 591 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Nin9g02322 | 591 | Gene3D | - | 20 | 145 | IPR008972 | - | |
| Nin9g02322 | 591 | Pfam | Multicopper oxidase | 34 | 147 | IPR011707 | GO:0005507(InterPro) | |
| Nin9g02322 | 591 | SUPERFAMILY | Cupredoxins | 376 | 552 | IPR008972 | - | |
| Nin9g02322 | 591 | Pfam | Multicopper oxidase | 159 | 313 | IPR001117 | - | |
| Nin9g02322 | 591 | SUPERFAMILY | Cupredoxins | 21 | 172 | IPR008972 | - | |
| Nin9g02322 | 591 | FunFam | Monocopper oxidase-like protein SKU5 | 21 | 145 | - | - | |
| Nin9g02322 | 591 | Gene3D | - | 157 | 347 | IPR008972 | - | |
| Nin9g02322 | 591 | FunFam | Monocopper oxidase-like protein | 157 | 350 | - | - | |
| Nin9g02322 | 591 | Gene3D | - | 363 | 562 | IPR008972 | - | |
| Nin9g02322 | 591 | SUPERFAMILY | Cupredoxins | 156 | 349 | IPR008972 | - | |
| Nin9g02322 | 591 | PANTHER | MULTI-COPPER OXIDASE | 45 | 532 | IPR045087 | GO:0016491(PANTHER)|GO:0046658(PANTHER) | |
| Nin9g02322 | 591 | FunFam | Monocopper oxidase-like protein | 362 | 561 | - | - | |
| Nin9g02322 | 591 | Pfam | Multicopper oxidase | 396 | 534 | IPR011706 | GO:0005507(InterPro)|GO:0016491(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Nin9g02322 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Nin | Nin-Chr8:25450195 | Nin9g02322 | Nin-Chr9:34912103 | dispersed | |
| Nin | Nin-Chr9:8500502 | Nin9g02322 | Nin-Chr9:34912103 | dispersed | |
| Nin | Nin-Chr9:29413115 | Nin9g02322 | Nin-Chr9:34912103 | dispersed | |
| Nin | Nin-Chr9:34912103 | Nin8g02770 | Nin-Chr8:39140565 | transposed |