AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy1g05482 ATGGAGTTTTGGGTGGTTGCAGCTGCTACTGGTGCAGGATATGTTGCCAAACACTGGCAGAATTTATCAGGGGAGGGAGATGGCTCATCAAAGTTATCACCCCGGGTGCAACCAGACGTATGCCAAGTGGTCGGTAAAATGCCTAACTCAATTCTTCCATTACCAAACTTGGGAAAAAGATGTTTGTTAAATGAAGAGGTTTCTTCTGAGAAAGAACACAACAAAGTGGGGATTGATCTTCAAGATAAAACAGATGAAATCAATGTGAAACACGAGTATGTTGACACTCGTTTACATGAATTCAGAACCACAAACTCAAATCGAAAATCTTGCTTAAGCCCAAGGCCGTTAGTGGTATCCAGAAATAGAAATGATTATCAAAGAAAACAGGCTACACAAGTTGATGATGTGAAGGATCATAAGATCATTTTCATGGAAGGGAATGGTGCATCTATGGAAGCAGAACTCTTTGAACCAACTGGATCATTAAAGCTTCCAACAAGACCAGAAGAAATACATATCAAGAGGTTTGAAACAAAAGATCTTCATTCACAAGGAAACGACATGGTGTCTTTGTTCCTCGGGATAACAATTGGTATATTATCAACTACCATGACTAATCAACATGAAATTGAGCATCTAAACGGGCTGCTAGAACAAGCTGAGAATATGGTTCAAGATTTACACAACAAACTTGAAATAAAAGAGGGTTTTACCACAAAGGAGCATGGACCGAAGGCCAACACAACAGCAACCAATAGCCCAACCGCAGAAAACTTGAGGCTAACAAGTGAGATCGAGGCAGAGCTTGAGGCTGAGCTGGAGAGATTGGAAGAAAATATGAAGGATCAGACCCTGCAGAGATTGTCTAATGTAATGGAGATCGATTCAGATTTTGAAGCAGACATGGCTCGAGGTGACCTGAACCTAGATGCACTCACCTGGCAACTTGATAGCCAATCCGAATCAGATGGCTACAAAATTGACAAAAGTGAAAGCACCGGAATTCCTGTTTTCACTCCAAACTATGTGGTTTCATCGCTGGACTTACGGTTACGTCTACATGAAGTAATCGAGTCAGAACTCAGAGCACGTATCGAGGAGCTGGAGGCAGTTCTCAAGAACCAAAACACAGAAAGGAGTCCCAAACCGCAATCTCCTGAACCATATGAAGAAGACAACTCTTTTTGGGACTTTGATCACACGAGAATTGAATCATCATCATCAACCCCTTAA 1236 41.67 MEFWVVAAATGAGYVAKHWQNLSGEGDGSSKLSPRVQPDVCQVVGKMPNSILPLPNLGKRCLLNEEVSSEKEHNKVGIDLQDKTDEINVKHEYVDTRLHEFRTTNSNRKSCLSPRPLVVSRNRNDYQRKQATQVDDVKDHKIIFMEGNGASMEAELFEPTGSLKLPTRPEEIHIKRFETKDLHSQGNDMVSLFLGITIGILSTTMTNQHEIEHLNGLLEQAENMVQDLHNKLEIKEGFTTKEHGPKANTTATNSPTAENLRLTSEIEAELEAELERLEENMKDQTLQRLSNVMEIDSDFEADMARGDLNLDALTWQLDSQSESDGYKIDKSESTGIPVFTPNYVVSSLDLRLRLHEVIESELRARIEELEAVLKNQNTERSPKPQSPEPYEEDNSFWDFDHTRIESSSSTP 411
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy1g05482 411 PANTHER EMB|CAB62613.1 1 376 IPR040348 GO:0008356(InterPro)
Pdy1g05482 411 Coils Coil 211 231 - -
Pdy1g05482 411 MobiDBLite consensus disorder prediction 373 411 - -
Pdy1g05482 411 Coils Coil 359 379 - -
Pdy1g05482 411 Coils Coil 260 287 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy1g05482 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4108153 Pdy Pdy1g05482 Pdy-Chr1:115868413 Pdy6g03030 Pdy-Chr6:71909461