Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy1g05486 | ATGGCTAACAAAGACAGAGGGGAGGTCAGGATTCATGAAAGTTTAGATGAACTTAGCACGGATTTAGCTGATTATATAGCAGAATTATCTGAAGCATCAGTTAAAGAGCGTGGCGTTTTTGCTATTGCTTTATCTGGTGGTTCACTCATTAGCTTGATGAGGAATTTGTGTGGAGCTCCTTATAACAAGACTGTAGATTGGTCCAAATGGTATATATTTTGGGCAGATGAACGTGTGGTTGCCAAGAATCACGTTGATAGCAACTATAAACTTGCCAAAGATCATCTTTTGTCTAAGTTGCCTGTTGTTCCAAGCCATGTACATTCCATCAATGATTCTCTGACTGCAGAAGAAGCTGCAAATGACTACGAGTTTGTGATCAGACAGCTGGTCAGGACCCGTGTGGTCAACGTTTCTGATGTCAGCGACTGCCCGAAGTTTGATTTAATCCTTTTAGGGATGGGTCCGGATGGCCATGTGGCATCTTTATTCCCGAACCATCCGGTTCTTGAAGAAAAGAATGAGTGGGTGACATTTATCACCACTTCCCCTAAGCCACCTCCTGAAAGAATCACATTCACCCTGCCTGTTATCAACTCTGCTGCCAATGTGGCAGTGGTGGTGACAGGTGGCGGGAAAGCGGAAGCTGCACGTCTGGCAATAGATGACGTGGGCCCCGAGTGCCATGTGTTGCCAGCTAGGATGATTGAACCAGCTGTAGGGAAACTGGTTTGGTTTTTGGATAGCCAGGCTGGTTCAAAGCTCAAGGGCTTTTCTAAATTTTCTAAGTAG | 792 | 45.2 | MANKDRGEVRIHESLDELSTDLADYIAELSEASVKERGVFAIALSGGSLISLMRNLCGAPYNKTVDWSKWYIFWADERVVAKNHVDSNYKLAKDHLLSKLPVVPSHVHSINDSLTAEEAANDYEFVIRQLVRTRVVNVSDVSDCPKFDLILLGMGPDGHVASLFPNHPVLEEKNEWVTFITTSPKPPPERITFTLPVINSAANVAVVVTGGGKAEAARLAIDDVGPECHVLPARMIEPAVGKLVWFLDSQAGSKLKGFSKFSK | 263 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy1g05486 | 263 | CDD | 6PGL | 16 | 247 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Pdy1g05486 | 263 | NCBIfam | 6-phosphogluconolactonase | 11 | 255 | IPR005900 | GO:0005975(InterPro)|GO:0006098(InterPro)|GO:0017057(InterPro) | |
| Pdy1g05486 | 263 | SUPERFAMILY | NagB-RpiA-CoA transferase-like | 9 | 256 | IPR037171 | - | |
| Pdy1g05486 | 263 | Gene3D | - | 5 | 258 | - | - | |
| Pdy1g05486 | 263 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 3 | 256 | IPR039104 | - | |
| Pdy1g05486 | 263 | Pfam | Glucosamine-6-phosphate isomerases-6-phosphogluconolactonase | 15 | 245 | IPR006148 | GO:0005975(InterPro) | |
| Pdy1g05486 | 263 | FunFam | Probable 6-phosphogluconolactonase | 4 | 256 | - | - | |
| Pdy1g05486 | 263 | Coils | Coil | 15 | 35 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy1g05486 | K01057 | 6-phosphogluconolactonase [EC:3.1.1.31] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 4108157 | Pdy | Pdy1g05486 | Pdy-Chr1:115936833 | Pdy9g00332 | Pdy-Chr9:6024420 |