Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy3g03085 | ATGGAAATGCAAAATGACTTCGATCGGCTTCTTTTTTTCGAGCATGCTCGCCGCAGCGCCGAAGTTACTTACGCGAAAAACCCTCTCGACATCGAGAACCTAACCAGATGGGGAGGGGCTTTGCTTGAATTGTCGACTTTTCAGAGTGTTGAGGAATCAAAATCTATGATTAAAGATGCTATATCGAAATTGGATGAAGCATTGTCGATTGATCCAAAGAAACATGATGCTTTGTGGTGTATGGGCAATGCACAAACTTCTTATGCTTTTCTGACTCCTGACAAAGATGAGGCCAAGGGTTATTTTGATTCAGCTTATACTTACTTTCAGCAGGCTGTTGATGAGGATCCAGGGAACGAACTTTACCTCAAGTCATTCGAAGTGGCAACAAAGGCTCCTCAATTACACTCAGAGCTCCATAAACAGAGTTTTGCTCAACAAACCATGGGATCAGGGGCAGCAGGAGGTCCTTCCACTTCTTCAAGTGTCAAGGGACCCAAGGCACAAAAGAGTAGCGACCTGAAGTATGATATATTTGGATGGGTTATTCTAGCTGTTACGATTGTGGCATGGGTTGGATTCGCTAAAGCAAATGTACCCTCACCACCTCCTCGATAA | 618 | 44.17 | MEMQNDFDRLLFFEHARRSAEVTYAKNPLDIENLTRWGGALLELSTFQSVEESKSMIKDAISKLDEALSIDPKKHDALWCMGNAQTSYAFLTPDKDEAKGYFDSAYTYFQQAVDEDPGNELYLKSFEVATKAPQLHSELHKQSFAQQTMGSGAAGGPSTSSSVKGPKAQKSSDLKYDIFGWVILAVTIVAWVGFAKANVPSPPPR | 205 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy3g03085 | 205 | MobiDBLite | consensus disorder prediction | 148 | 168 | - | - | |
| Pdy3g03085 | 205 | Pfam | Plant specific mitochondrial import receptor subunit TOM20 | 7 | 196 | - | - | |
| Pdy3g03085 | 205 | Gene3D | Tetratricopeptide repeat domain | 1 | 150 | IPR011990 | GO:0005515(InterPro) | |
| Pdy3g03085 | 205 | SUPERFAMILY | TPR-like | 13 | 124 | IPR011990 | GO:0005515(InterPro) | |
| Pdy3g03085 | 205 | PANTHER | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED | 1 | 204 | IPR010547 | GO:0005742(InterPro)|GO:0045040(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy3g03085 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pdy | Pdy-Chr2:8172354 | Pdy3g03085 | Pdy-Chr3:88524339 | wgd | |
| Pdy | Pdy-Chr3:88524339 | Pdy3g04125 | Pdy-Chr3:103740800 | wgd |