Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy3g03114 | ATGGGTAGTGCGTTTAATCCACAAGTTTTGGTGGAAAAGCTGGCCAAACTCAATAGTTCACAGCAAAGCATTGAGACTCTGTCACACTGGTGTATCTATCATATAGCAAAGGCAAAACAAATTGTTGAAACATGGGCTAGGCAATTCCGTTGCTCCCCACGTGAGCAACGTGTAGCTTTTCTCTATCTTGCAAATGATATACTGCAGAATGGTAGGCGAAGGGGTTCAGAGTTTGTTGGTGAATTCTGGAAGGTTCTTCCAGAAGCACTCCATGATGTAATTGATAATACCGATGAATCCGGAAGAAATGCTGCGTTACGCCTGGTCAAGATTTGGGAGGAAAGAAAGGTTTTTGGCTCTCGGGGTCAGATCCTGAAGGAAGAACTGGTTGGAAGGCACCTAGAAACTAGTAACAGAAACGAAAAGCATTCAGGGTCAAAATTGCTACGGTCTGTTGAAAATGCATTGGACAAGATAGTTTCAGGATATCAGTATATTTATGGTGGTCAGATTGATGAAGATGCCATAATCAGCAAATGCAAAATGAATATTAGCTGTGTTGAAAAAGTGGAGAAAGAATTCAGTGGTGATTTGAGCTCTGCACAAGTGAATGGGTTGGGTATGATGGAAGAGCTCAGGGGGCACAACGCCACTTTGAAGGATTGTATCGAGCAACTTTCAGCTGTAGAAGCGTTACGAATTAATCTTGTTTGTTATTTACGGGAGGCTCTTCAAGAGCAGGAAATGAAGCTGGATCAAGTCAGTAATGTACTTAAGGCTGCACATACCCAATCGGAAAAGGCTGATAATTTATGCAGGCAATTGCAAAATCCTGATGGCACAAAGTTACTTCCTGGAATTGATGAACCATCTGCACCATTAATGTCCACACAGAACATTCCCGTCTCTGATCAACCCAATGATTATAATAAATCTGCTGCGGCTGCAGTGGCGGCAAGCTCCACATCTTCATCTGAAATGCTCTCATCTGTCCTTTCTTCCTTTGCTTCTGAGGGAGTTGTCAGCAATTCAGTTAACGAATCATCATCGGTTGACTACCCTCCAGAGAAGAGAACCAAGATCGAGAATGTTCAAATTCCTCGACCACCTGTTCCATCAGAGTCACCCCATGATCAACCACCACCTCCACCATCATCTCCACTGCCTCCGCGGCCTCTACCTCCCATGCAAGCATACCGTGTACCCCCATTCCTTCAGACTGCAGGGTCAGTACTCTATGGCTGCACTAACCAACCACCACCTCGGTCTTTGCCAGGGTATCCGACCTTCCGCCCTCTGATCAACAGTGGTGGTCCATTCACACCAGCACCAGCACCACCACCACCACCAACTGCTTACCAGGCCTATCAAATGGAAGGTGGGTTCTCTACCCAACCAATGGCCCCTATGTCTAGACAGTAG | 1422 | 45.71 | MGSAFNPQVLVEKLAKLNSSQQSIETLSHWCIYHIAKAKQIVETWARQFRCSPREQRVAFLYLANDILQNGRRRGSEFVGEFWKVLPEALHDVIDNTDESGRNAALRLVKIWEERKVFGSRGQILKEELVGRHLETSNRNEKHSGSKLLRSVENALDKIVSGYQYIYGGQIDEDAIISKCKMNISCVEKVEKEFSGDLSSAQVNGLGMMEELRGHNATLKDCIEQLSAVEALRINLVCYLREALQEQEMKLDQVSNVLKAAHTQSEKADNLCRQLQNPDGTKLLPGIDEPSAPLMSTQNIPVSDQPNDYNKSAAAAVAASSTSSSEMLSSVLSSFASEGVVSNSVNESSSVDYPPEKRTKIENVQIPRPPVPSESPHDQPPPPPSSPLPPRPLPPMQAYRVPPFLQTAGSVLYGCTNQPPPRSLPGYPTFRPLINSGGPFTPAPAPPPPPTAYQAYQMEGGFSTQPMAPMSRQ | 473 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy3g03114 | 473 | ProSiteProfiles | CID domain profile. | 2 | 134 | IPR006569 | - | |
| Pdy3g03114 | 473 | FunFam | ENTH-VHS family protein isoform 1 | 2 | 130 | - | - | |
| Pdy3g03114 | 473 | Gene3D | - | 2 | 130 | IPR008942 | - | |
| Pdy3g03114 | 473 | PANTHER | CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN | 3 | 462 | - | GO:0000993(PANTHER)|GO:0031124(PANTHER) | |
| Pdy3g03114 | 473 | MobiDBLite | consensus disorder prediction | 275 | 307 | - | - | |
| Pdy3g03114 | 473 | MobiDBLite | consensus disorder prediction | 339 | 399 | - | - | |
| Pdy3g03114 | 473 | SMART | 558neu5 | 9 | 130 | IPR006569 | - | |
| Pdy3g03114 | 473 | MobiDBLite | consensus disorder prediction | 369 | 399 | - | - | |
| Pdy3g03114 | 473 | SUPERFAMILY | ENTH-VHS domain | 11 | 117 | IPR008942 | - | |
| Pdy3g03114 | 473 | CDD | CID-RPRD-like | 7 | 129 | - | - | |
| Pdy3g03114 | 473 | MobiDBLite | consensus disorder prediction | 422 | 455 | - | - | |
| Pdy3g03114 | 473 | MobiDBLite | consensus disorder prediction | 439 | 453 | - | - | |
| Pdy3g03114 | 473 | Coils | Coil | 244 | 264 | - | - | |
| Pdy3g03114 | 473 | MobiDBLite | consensus disorder prediction | 292 | 307 | - | - | |
| Pdy3g03114 | 473 | Pfam | CID domain | 9 | 120 | IPR006569 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy3g03114 | K15559 | regulator of Ty1 transposition protein 103 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 132458 | Pdy3g03114 | Pdy8g02410 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pdy | Pdy-Chr3:88960241 | Pdy5g02732 | Pdy-Chr5:78003690 | dispersed | |
| Pdy | Pdy-Chr3:88960241 | Pdy8g02410 | Pdy-Chr8:59265009 | wgd |