Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy3g03120 | ATGAAGTCATGGAAGCTTGGGCGTAAACTGTCGTTGCAGAAGAGCGATTTCAAGGAGATGAGAGATCACCAGCCTTCTGCCCATTTAGATGAGCTTGATCAGGCTTCCAAGGATATGCAAGACATGCGAAGCTGCTATGATGGCTTGTTATCTGCTGCTGCTGCAACAGCAAATAGTATATATGAATTTTCGGAGTCGCTAAATGAAATGGGGAACTGTTTAATGGGGAAAACTGCCGTGCACGATAATGCCGAAAATGGAAAAGTGCTAACAACTTTGGGAAATATGCAGTTGGAACTTCAGAAAATTGCTGATACTTATCGTTCTTATGTGATTGTGACAATTACAAACCCAGCAGAGTCTCTCCTCAGTGAGCTACGGAAAGTGGAGGAGATGAAACTTCAGTGTGATGAAAAAAGAGATGTCTATGAATACATGATGGCACAACACAAAGAGAAGGGAAAACTGAGAAATGGTAAAGCTGAAAGTTCTATCTTTCAAAAACTGCAAGAAGCTCAAGAGGAATATGATGAAGTGACTAGATTATGTGTATTTCGGGTTAAATCACTGAAAGAAGGACAATGGCGCAGTCTATTAACTCAAGCTGCTCGCCATCATGCTGCACAGTTGAATTTCTTTCGCATGGGACTCAAAGCTGTTGAAGCAGTTGAACCTTTAATAAGAAATGTTGCTGAAAAGCATCGCATTGATTATCAACTGAGTGGACTATATGATCGGGGGGAGTCCCGGGAAGGTGAACCTATGAGTGGCTATGAAAGTACTGATGATGGAGAACTGAGTTTTGATTACAAGCAGAAGAAACAAGGGCTTGATGATGATGGCACCTCACCAAATCCGATGGAGCTGGACCGGGTAGATGTCCCATATTTTCAAGCTTCAATTTTAGAAGATTCAGAGATAAATCTGAGGAAACATAAAGGGGATCAACATTATGGTCAGCAAACTAGAGTTAGCAGCTATTCCGCCCCACTATTCCCTGACAAGATTAATGCTGCATCTGAAAGGCATAAAGAGACACAACCCACACGAAAATTTTACTCTTATGTACTACCTCCCCCTGTTGTAGATACCCGGAATCCAAATTCAAGAACCTCTACATCTGCTACTCAATCCACTCCAATTCAAAATTTGCAACATGAGAACAACACATCGACATCTGCGTTAACCTCAAAGATCCAGTCTGCGACAAAAGATGGAAACACCGTTAATTCTCCCATCCAGTTACCCGCTCCTTCTACTGGAAGATTTTCATTCTCACAATGGGATAATTATAGCAGTACTGAAAGTAAAGTAGCCAAACGACAATCTTATTCTGGTCCATTACCACCAAGCAAGCAATTTTCTTTCAAGATGGCATCAAATAATAGTGGGCCCATTACTTCTACCGAACTTCCTCAACCACCTTCTCGTGTGCCGTATTCTCAGCCAAATTTGTCATCAAACGTGCCCCGTAGTGCTTCACCTCCCCCTTTATCTTCACCTAAAATAAGTGAGCTTCATGAGCTTCCTAGGCCTCCTTCTAGTAGTAATTTAGCTCTTTCAAAACCTGTTGGTATGTCTAGTGGTTTGGTTGGACATCCAGCACCCTTACTTCTAAAGAATCAGGAGATTTCTCCACCAAATAAAAGGGCTATGCTAACATCGACTTGTGCATCCCCTCTTCCACTTCCCCCTTGTGTTGTCAAAATCCCCTCGAGTAATGCTGAGACGTAA | 1734 | 42.21 | MKSWKLGRKLSLQKSDFKEMRDHQPSAHLDELDQASKDMQDMRSCYDGLLSAAAATANSIYEFSESLNEMGNCLMGKTAVHDNAENGKVLTTLGNMQLELQKIADTYRSYVIVTITNPAESLLSELRKVEEMKLQCDEKRDVYEYMMAQHKEKGKLRNGKAESSIFQKLQEAQEEYDEVTRLCVFRVKSLKEGQWRSLLTQAARHHAAQLNFFRMGLKAVEAVEPLIRNVAEKHRIDYQLSGLYDRGESREGEPMSGYESTDDGELSFDYKQKKQGLDDDGTSPNPMELDRVDVPYFQASILEDSEINLRKHKGDQHYGQQTRVSSYSAPLFPDKINAASERHKETQPTRKFYSYVLPPPVVDTRNPNSRTSTSATQSTPIQNLQHENNTSTSALTSKIQSATKDGNTVNSPIQLPAPSTGRFSFSQWDNYSSTESKVAKRQSYSGPLPPSKQFSFKMASNNSGPITSTELPQPPSRVPYSQPNLSSNVPRSASPPPLSSPKISELHELPRPPSSSNLALSKPVGMSSGLVGHPAPLLLKNQEISPPNKRAMLTSTCASPLPLPPCVVKIPSSNAET | 577 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy3g03120 | 577 | CDD | BAR | 38 | 225 | - | - | |
| Pdy3g03120 | 577 | MobiDBLite | consensus disorder prediction | 364 | 424 | - | - | |
| Pdy3g03120 | 577 | PANTHER | HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE | 1 | 574 | IPR037488 | - | |
| Pdy3g03120 | 577 | SUPERFAMILY | BAR-IMD domain-like | 30 | 227 | IPR027267 | - | |
| Pdy3g03120 | 577 | MobiDBLite | consensus disorder prediction | 357 | 424 | - | - | |
| Pdy3g03120 | 577 | MobiDBLite | consensus disorder prediction | 246 | 265 | - | - | |
| Pdy3g03120 | 577 | Gene3D | Arfaptin homology (AH) domain-BAR domain | 23 | 239 | IPR027267 | - | |
| Pdy3g03120 | 577 | MobiDBLite | consensus disorder prediction | 439 | 520 | - | - | |
| Pdy3g03120 | 577 | MobiDBLite | consensus disorder prediction | 439 | 493 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy3g03120 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 132460 | Pdy3g03120 | Pdy6g01927 | |
| 132461 | Pdy3g03120 | Pdy8g02414 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pdy | Pdy-Chr2:9081411 | Pdy3g03120 | Pdy-Chr3:89045977 | wgd | |
| Pdy | Pdy-Chr3:89045977 | Pdy3g04091 | Pdy-Chr3:103230030 | wgd | |
| Pdy | Pdy-Chr3:89045977 | Pdy6g01927 | Pdy-Chr6:56058915 | wgd | |
| Pdy | Pdy-Chr3:89045977 | Pdy8g02414 | Pdy-Chr8:59292450 | wgd |