AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy3g03124 ATGAACCCAAACCAACCACCACCACCTCCTTATTCTTATTCTTCTTCTTCTTCTTCATCTGATCCGTCCGCCGGTTATAGTGGGACTCACGTCATGGGTACACCGGTGCCTCCGTCCTCCCACCACGCCCCGCCCAACGCTTACGTCCAATACGGCGCCACTAATCCTCCGCCTCCGCCTCCGCCCCATAACATGGATAACGTCCGTAAGAAACTTAATTTATGGGGAAACAAGGCGGAGGCCACCGCAACCAACATCTGGACAAATCTGAAAGCGGGTCAATCTGTGACCGGATCGGCATGGGGGAAAATGAATTTGACGGCAAAAGCTTTAACCGAAGGTGGATTCGAATCGCTGTACAAGCAGAATTTCACGACTTACCCAAACGAGAAGCTGAACCGGACTTTTGCGTGTTACTTGTCGACGTCCACCGGACCTGTCGCCGGAACCCTATATCTTTCCAATATTCATGTCGCCTTCTGTAGCGATCGCCCCTTATCCTCCATCCAACCCAACGGCATGGAATCCTGGATTTATTACAAGGTGATCATCCCATTGGAGAAGATAGCGACGGTGAATCCAGTAACAGTGCCAGGTAAGAAACAAATCGACAAGTACATACAGCTGTCCACAATCGACGGTCAAGATTTCTGGTTCATGGGATTCGTAAACCATGATAAAGCATCAAAACATCTCCTCAACGGTGTCGCCACTTGTGTTAAATCCATCCCAGTTATCCCATGA 744 49.6 MNPNQPPPPPYSYSSSSSSSDPSAGYSGTHVMGTPVPPSSHHAPPNAYVQYGATNPPPPPPPHNMDNVRKKLNLWGNKAEATATNIWTNLKAGQSVTGSAWGKMNLTAKALTEGGFESLYKQNFTTYPNEKLNRTFACYLSTSTGPVAGTLYLSNIHVAFCSDRPLSSIQPNGMESWIYYKVIIPLEKIATVNPVTVPGKKQIDKYIQLSTIDGQDFWFMGFVNHDKASKHLLNGVATCVKSIPVIP 247
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy3g03124 247 Gene3D - 116 237 IPR011993 -
Pdy3g03124 247 MobiDBLite consensus disorder prediction 1 68 - -
Pdy3g03124 247 PANTHER GEM-LIKE PROTEIN 2 36 234 IPR037848 -
Pdy3g03124 247 MobiDBLite consensus disorder prediction 51 65 - -
Pdy3g03124 247 Pfam GRAM domain 121 231 IPR004182 -
Pdy3g03124 247 SMART gram2001c 118 196 IPR004182 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy3g03124 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
132462 Pdy3g03124 Pdy6g01877
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr3:89101269 Pdy8g01676 Pdy-Chr8:50166216 dispersed
Pdy Pdy-Chr3:89101269 Pdy3g04087 Pdy-Chr3:103197947 wgd