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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy3g03131 ATGGAGACACCATCGCCGCCGGACGGCTCCACAGTAGATGATTCGGAGATAGAATACGTGAGCTATGCCGGAGAGCATCACTTGCCTCTTATCATGCGCCTCGTCGATGAGGAACTCAGCGAACCCTACTCCATCTTTACCTATCGTTACTTCGTCTATCTCTGGCCCAATCTCTCCTTCCTCGCTTTCCATAAAGGAAAATGCATCGGAACTGTGGTTTCTAAGATGGGAGAACACCGTAACACTTTCAGAGGATACATCGCGATGCTCGTTGTCCTGAAACCTTACCGTCACAAAGGCATTGCTACAGAACTTGTTACCAGATCCATTAAAGTGATGATGGAGTCAGGTTGTGAAGAGGTAACTTTGGAAGCAGAGGTAACAAATAAGGGAGCTCTTGCATTATATGGCCGACTTGGGTTTATAAGAGCAAAAAGGCTATTTAGATACTACTTGAACGGTGTTGATGCTTTTAGATTGAAGCTGCTATTTCCACATCAAGAATTACCCCACTCCCACCCGCATGCCCACTCTCACTCGCATTCTGTGATGTCATCGGTCCTTGAGAGTTATGAAGCAAATGAAACAAAGAAAGATTGGTCCTTGGGTGAAGTTTAG 618 45.79 METPSPPDGSTVDDSEIEYVSYAGEHHLPLIMRLVDEELSEPYSIFTYRYFVYLWPNLSFLAFHKGKCIGTVVSKMGEHRNTFRGYIAMLVVLKPYRHKGIATELVTRSIKVMMESGCEEVTLEAEVTNKGALALYGRLGFIRAKRLFRYYLNGVDAFRLKLLFPHQELPHSHPHAHSHSHSVMSSVLESYEANETKKDWSLGEV 205
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy3g03131 205 CDD NAT-SF 59 124 - -
Pdy3g03131 205 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 17 165 IPR000182 GO:0016747(InterPro)
Pdy3g03131 205 PANTHER N-ALPHA-ACETYLTRANSFERASE 30 13 168 IPR044542 GO:0004596(InterPro)|GO:0004596(PANTHER)|GO:0017196(InterPro)|GO:0017196(PANTHER)|GO:0031417(PANTHER)
Pdy3g03131 205 FunFam N-alpha-acetyltransferase MAK3 isoform A 24 178 - -
Pdy3g03131 205 Gene3D - 20 199 - -
Pdy3g03131 205 Pfam Acetyltransferase (GNAT) family 31 141 IPR000182 GO:0016747(InterPro)
Pdy3g03131 205 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 22 165 IPR016181 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy3g03131 K00670 N-alpha-acetyltransferase 30 [EC:2.3.1.256]
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Pdy Acetyltransf_1 3.4e-16 CL0257 TR GNAT