AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy3g03133 ATGGAGGACAGCTTCAAAGTTCGAGTTGATAAGACTTTCGGCACTCTTCAAGCTTCTTCATCGTCTTCAATCCAATCGACTTCATCATCTCTCAACTCCCTCTGGTGCCTCACCGATGAAGAAATCGAAACAAACAGATGGATTCAAGATAAAATCGATCCTCACAAAGACAACGATGAACTCATCCACCATCTCAAGAATCCCAAACCCTATTCTCCCTTTCTCCAAGGTCTTCTTGCCCAACCCTCGACTTCCGAACAAGACCTGGAAGCCGACATTCAAGAGCTTGACGATGACGGCGAAGATGATGATGACGATGAAGATAACCGGCAGCCGCAGCTGCAGAAGCCGGAGGATCACAGCAACGAGGATTGGGATATTCGAACTTCCGTCGGCATGGATTGCACTCTCGATAACGAGGAAGAGGAAGATGCTTATGACAAGGTGGCTGTAGGCAGGGAAGAATCTGCAGATCGATTTTACATGAAAGCCGTTAATGATTATGAAGTTGACATAGATTCAAACAAAGAGCTTCCCAGCTCATTTACTGACGTAATCAGGGATCCCCGAGCAAATCACAAGGCAGCTAAACTCAGGCTCAAAGAAGATGATGAATCTGCTAAGAAATTGGGCTTACAGGTTTCTGAGAACAACATTCAGGATCCAAATCAGTTTACTAATGAACTGAAGGAACATTTTGCAAGAGCAACATTTCCGGAACCCGAGAGTTTATCTACTGTTCCAGATCATGTACTCAATCCTTCAAAATACACGCATTATACATTTGATTCAATGGATGATATTGATGAAGAATCTAATCGAAAAGCTTATATGGAGTTCTTTAATTCACTGAGGGGGTCAAGTGGCATGGAGGTACAGGATGATGTTTCCAATGGTTCTGCTACATCTATCATCTTTACTCCAAGAAAGGAATCGAGTGATGTCTCAATGAAGAATAGCAAGGGAGATGGATATGAAATCAAGAAAGTTGTTCCCATTAGTATTATTGCAGATAGTGAGGTTTGCATGATGGATGAAGATGAGCCTGAGATCGCAACCAGTAATAACAGCAGCTTGCAGAAAGGTGGTCGCAGGTATCGAACAAAGGGCAGTACCCATATCGAATGA 1128 43.17 MEDSFKVRVDKTFGTLQASSSSSIQSTSSSLNSLWCLTDEEIETNRWIQDKIDPHKDNDELIHHLKNPKPYSPFLQGLLAQPSTSEQDLEADIQELDDDGEDDDDDEDNRQPQLQKPEDHSNEDWDIRTSVGMDCTLDNEEEEDAYDKVAVGREESADRFYMKAVNDYEVDIDSNKELPSSFTDVIRDPRANHKAAKLRLKEDDESAKKLGLQVSENNIQDPNQFTNELKEHFARATFPEPESLSTVPDHVLNPSKYTHYTFDSMDDIDEESNRKAYMEFFNSLRGSSGMEVQDDVSNGSATSIIFTPRKESSDVSMKNSKGDGYEIKKVVPISIIADSEVCMMDEDEPEIATSNNSSLQKGGRRYRTKGSTHIE 375
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy3g03133 375 MobiDBLite consensus disorder prediction 96 128 - -
Pdy3g03133 375 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 205 284 IPR029338 -
Pdy3g03133 375 MobiDBLite consensus disorder prediction 347 375 - -
Pdy3g03133 375 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 371 IPR029338 -
Pdy3g03133 375 MobiDBLite consensus disorder prediction 109 127 - -
Pdy3g03133 375 MobiDBLite consensus disorder prediction 350 365 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy3g03133 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr2:9245511 Pdy3g03133 Pdy-Chr3:89177330 wgd