AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy3g03139 ATGGCGACAATTAGCACACATAATACCAAACACGATCGTGAAGTCATACGATTGGAACGTGAAGCTGTAATTCCAGTTTTGAAACCTAAGCTCATCATGACTTTGGCCAACCTCATCGAACAGAGTTCTGACCGGGCAGAGTTCTTGAAGCTCTGCAAGAGAGTTGAGTACATGATTCGAGCATGGTATTTTCTTCAGTTTGAAGATCTTATGCAACTATATGCACTCTTTGATCCTGTCTATGGGGCTGAGAAATTAGAGCAGCAAAATTTGTCCTCAGAAGAGATTGATGTTCTTGAACAGAACTTCCTGAGTTATATGTTTAAGGTAATGCAAAAGAGTAATTTTAAGATTACTACCAATGAGGAGATAGCGATAGCACAATCAGGACAGTATCTACTCAATCTTCCTATCTCAGTGGATGAATCAAAGCTTGATAAGAATTTATTAAAGAGGTACTTCAAGGAGCATCCTCAAGAAAACCTTCCCGACTTTGCAGATAAGTATATAATCTTTCGGCGTGGAATTGGAATTGATCGAACAACTGATTACTTTATCATGGAGAAGATGGACATGATTATTGCACGTATATGGGCATGGATCATGAGAGTAACTAGGGTAGAAACTTTTTTTCCAAGAAAAACAAATGTACCCCTTATGAAAGAGAAGAAGAAAGATGATGAAATTATAAGTGAAGAATCTCAGGATGACTTGTATGTTGAGCGAATCCGAATTGAAAAAATGGAAATCAGTTTTCAGAATTTGGTGAGTAAGATTACAATCCAAGAACCTACATTTGACAGGATAATTGTTGTTTACAGACGAGCAGGAACCAAGGCGAAAAAGGAACGAGGAATCTATGTGAAGCATTTAAAACAGATCCCAATGGCAGATATGGAAATCGTCTTGCCAGAAAAGAAAAATCCGAGTTTAACACCTATGGATTGGGTGAAATTTCTTACCACTGCTATACTCGGGCTGGCAGCTGCCACTGGTTCAATCGAAACGCCTCAAGCTGACTTTTGGGTCATTGTTGCCGTTGTCTCTACAGTAGTTGGTTACTGTGCCAAAATATACTTTACGTTTCAGGCAAACATGGAAACATATCAGAACTTAATTACACAATTTATGTATGATAAGCAACTGGATAGTGGAAAGGGCACCCTTCTTCATTTGTGTGATGATGTGATTCAACAAGAAGTAAAAGAGGTGATAATTTCTTTCTTTATATTAATGGAACAGGGAAAAGCGACTTTAAAGGAACTGGACCAGAAGTGTGAGGAACTGTTGAAAGAAGAGTTCGGAGAGAGATGCAACTTTGATGTGGATGATGCGGTCAATAAATTAGAAAACCTCGGCATTATTTCTAAGGATGAAATAGGAAGGTATTATTGTGCTGGTCTTAAACGTGCAAACGAGATCATCGGCACCACCACAGAAGAGTTGGTACTCAAGGCAAGACAGGAGGCCACAGCCACTACTGCTTAA 1488 39.05 MATISTHNTKHDREVIRLEREAVIPVLKPKLIMTLANLIEQSSDRAEFLKLCKRVEYMIRAWYFLQFEDLMQLYALFDPVYGAEKLEQQNLSSEEIDVLEQNFLSYMFKVMQKSNFKITTNEEIAIAQSGQYLLNLPISVDESKLDKNLLKRYFKEHPQENLPDFADKYIIFRRGIGIDRTTDYFIMEKMDMIIARIWAWIMRVTRVETFFPRKTNVPLMKEKKKDDEIISEESQDDLYVERIRIEKMEISFQNLVSKITIQEPTFDRIIVVYRRAGTKAKKERGIYVKHLKQIPMADMEIVLPEKKNPSLTPMDWVKFLTTAILGLAAATGSIETPQADFWVIVAVVSTVVGYCAKIYFTFQANMETYQNLITQFMYDKQLDSGKGTLLHLCDDVIQQEVKEVIISFFILMEQGKATLKELDQKCEELLKEEFGERCNFDVDDAVNKLENLGIISKDEIGRYYCAGLKRANEIIGTTTEELVLKARQEATATTA 495
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy3g03139 495 PANTHER AMINOPEPTIDASE (DUF3754) 8 490 - -
Pdy3g03139 495 Pfam Protein of unknown function (DUF3754) 266 387 IPR022227 -
Pdy3g03139 495 Coils Coil 412 432 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy3g03139 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
132465 Pdy3g03139 Pdy8g02429
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr3:89273916 Pdy8g02429 Pdy-Chr8:59406173 wgd