AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy3g03141 ATGGAGTTACAAATCCAGGTGGCGCAGGCCGTTCACGTCTTGAATCACGATACTCAGTCTTGCAATCGTGTCTCTGCTAATCAGTGGCTGGTTCAGTTCCAGCAGACAAATGCTGCTTGGGAGATCGCCACCTCAATTCTCACCGCTGACCATCCTACACCATACGTTTCTGATTTTGAAGTCGAGTTCTTTGCTGCCCAGGTTCTTAAGAGAAAGATCCAAAATGAAGGACACTGTCTGCAGCTGGAAGCAAAGGAATCACTTGTTAATGCTCTCCTTCTGGCTGCTAAAAGATTTAGTTTAGGGCCATCTCAGCTTTTAACACAAATTTGTCTGGCTCTATCCACACTCATACTTCATGCTGTGGAGTACTACAAACCAATCGAGAAGCTATTCTACAGTCTCCAGAATCTGCAAGGTCAGGATGATGGAAATATTGTAGTTATGGAAATGCTCACAGTTTTGCCAGAAGTTGTTGAAGACGAATGTGGTAATTACAAAACGAAGTCCGGTCAAAGAATTGACTATGGCCCAGAGCTGCTTTCACATACATCAGCAGTGCTAAAGTTCCTATTACAGCAATCTGAAGAAAGCTTTGATGGTGTCATTCAACTACATGAAAGGAGCAGAAAGATACTTCGCTGTTTGTTGAGTTGGGTTCGAGCTGGATGTTTCTCAGAATTTGCACCAGTCTCATTAATAGACCACCCCCTTCTTAATTTTGTTTTCAATTCTTTGCAGATTTCGTCCTCATTTGATCTGGCAATTGAGGTTTTGATAGAGCTTGTTGGTCGGCATGAGGGACTGCCTCAAGTTCTTATATGCAAAATAGGATTTCTTAAAGATGTTCTTCTTCGAGCGTTTAGTGGTCGAGATGAGAAAGTAATTAGTGGTCTTGCATGCTTGATGTCAGAGATTGGTCAGGCTGCTCCAAGTTTGATAATAGAAGCCCATTCTGAAGCAATTATGCTGGTGGATGCACTGTTGAGTTGTGTATCTTATCCAAGTCAAGATTGGGAGATTGCAGACTCAACCTTGCAGTTCTGGTGTTGTCTTGCAAGCAATATTGTTCGGATGGATATTGGGATTACAGAAAATAGCAAACATGTCAAAGATGTTTTCTCCCCAGTATTTTCTACATTGCTTGATGCTCTTCTGATGCGTTCTCAGGTCGATGATTCTACATATACTGGCGAGACTGCAACAAGGGACTTACCAGATGGCCTTGCTCAATTTAGGTTAAATTTAGTGGAGCTTTTGGTGGACATTTGCCAGCTTCTGCAGTCTGCTGTGTTTTTGCAAAAGATTTCTTTTGGTGTTTGGCTGTCTTCAAACATACAAATTTCTTGGAAAGAGGTGGAAACCAGAATGTTTGCTCTTAATGTGGTTGCTGATGTAGTACTGCAGGAAGGCCAACCATTTGATCTCTCCATGGTCTTGCATCTGGTGACAATTTTGTGTGACAGGGAATCATACGAACCGAAGGGCTTTATATGCATTGTACATAGATCACTTGCAGATGTTATTGGTTCCTATTCGAAGTGGATGTCTTCTTACATAACTAATGCCAGACCATTGCTTTTATTTTTTGCAGCTGGTATGTCAGAACCTTTGTGTTCACATGCTTGTGCAACTGCCTTCAGGAAGTTTTGTGAAGATTCAAGTGCAGTTATGCACAAACCTTCAAGTTTGGAAATGTTAATGTGGATCGGAGAGGGATTGGAGAAGAGACACTTACCTTTGGAAGACGAGGAAGATGTTATCGGTGCTCTTACTCTGATACTTGGATCCCTTCCTAACATGGATTTAAGAAATAGATTGTTACTTAAATTGCTTTCTCCTAGCTTTGGATCTATAGGCAAACTTATTGATGGGGATCATGCCCGTTCTTTGAGTCAACTACCAGGTGCTTATACTCATCTTGTCAACTCCGCAGCAAGGGGGTTTTTCAGGATAGGAAATGTTTTCAGCCATCTTGTAACAACACCCACTACATGTCATGATCTAGATAATTCTGTAGTAGTTGTTCTCGGGAGTTTTTGGCCTCTGCTCGAGAAATTCTTTCAGTCAGAGCACATTGAGAATGCAAGTTTATCTATGGTGGCATGTAAAGCCCTCTCACAAGCAATTAAGTCCGCAGGCCATCACTTTGTATCACTGTTACCCAAAGTTTTAGATTATCTGTCAACAAATTTTGCGTCGTTTCAAACTCATGAGTGCTACATTAAAACAGCTTCTGTTGTGGTCGAAGAATTTGGTAACAAGGAGGAATACGGACCTCTATTCATCAGTACACTTGAAAGATTTACAAATGCATCATCAGTAATGGCCCTAAATTCTTCATATGTTTGTGATCAAGAACCCGACCTTGTTGAGGCCTATTGTAGTTTCACGTCAATTTTTCTTCACAATTCTCCAAAGGAGGTCGTGGCTTCTTCTGGTCCCCTTTTAGAAGTTTCCTTTCAAAAAGCAGCTATATGTTGTACAGCTATGCACCGTGGAGCAGCACTTGCAGCAATGTCGTACATGTCTTGTTTCCTAGAGCTTTGCTTGACTTCATTACTGGAATCAGTGACATGTAACTCGGAATCAGTGGTTACATCCATGGCTGTTCATGTAATCTCTCACAGTGGCGAGGGACTTGTATCAAATGTGGTATATGCTTTACTTGGTGTTTCAGCAATGTCAAGGGTTCACAAATCTGCAACTATTTTGCAACAGTTGGCAGCAGTATGCAGCTTTTGCGAGAAAACACAGTGGAAATCTGTATTATGTTGGGATTCTTTAAACGGATGGCTACATGCCGCGGTGCGGAGTCTACCTGGGGAGTATTTAAGGCAAGGGGAAGCAGAATCTTTAGCAGGTATATGGGCAAAGGCCCTGGGGGATGCAGCAGTTGATTATGTTGAAAGCAGAACAAGTGGAGAGAAGAATCATAAACATATGCGGGGAAAAGGTGGCAGAATACTTAAGTCTATATTTCGAGAATTTGTTGATAGTCATCGAAACATTGCTACATGA 3021 41.77 MELQIQVAQAVHVLNHDTQSCNRVSANQWLVQFQQTNAAWEIATSILTADHPTPYVSDFEVEFFAAQVLKRKIQNEGHCLQLEAKESLVNALLLAAKRFSLGPSQLLTQICLALSTLILHAVEYYKPIEKLFYSLQNLQGQDDGNIVVMEMLTVLPEVVEDECGNYKTKSGQRIDYGPELLSHTSAVLKFLLQQSEESFDGVIQLHERSRKILRCLLSWVRAGCFSEFAPVSLIDHPLLNFVFNSLQISSSFDLAIEVLIELVGRHEGLPQVLICKIGFLKDVLLRAFSGRDEKVISGLACLMSEIGQAAPSLIIEAHSEAIMLVDALLSCVSYPSQDWEIADSTLQFWCCLASNIVRMDIGITENSKHVKDVFSPVFSTLLDALLMRSQVDDSTYTGETATRDLPDGLAQFRLNLVELLVDICQLLQSAVFLQKISFGVWLSSNIQISWKEVETRMFALNVVADVVLQEGQPFDLSMVLHLVTILCDRESYEPKGFICIVHRSLADVIGSYSKWMSSYITNARPLLLFFAAGMSEPLCSHACATAFRKFCEDSSAVMHKPSSLEMLMWIGEGLEKRHLPLEDEEDVIGALTLILGSLPNMDLRNRLLLKLLSPSFGSIGKLIDGDHARSLSQLPGAYTHLVNSAARGFFRIGNVFSHLVTTPTTCHDLDNSVVVVLGSFWPLLEKFFQSEHIENASLSMVACKALSQAIKSAGHHFVSLLPKVLDYLSTNFASFQTHECYIKTASVVVEEFGNKEEYGPLFISTLERFTNASSVMALNSSYVCDQEPDLVEAYCSFTSIFLHNSPKEVVASSGPLLEVSFQKAAICCTAMHRGAALAAMSYMSCFLELCLTSLLESVTCNSESVVTSMAVHVISHSGEGLVSNVVYALLGVSAMSRVHKSATILQQLAAVCSFCEKTQWKSVLCWDSLNGWLHAAVRSLPGEYLRQGEAESLAGIWAKALGDAAVDYVESRTSGEKNHKHMRGKGGRILKSIFREFVDSHRNIAT 1006
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy3g03141 1006 Gene3D - 3 962 IPR011989 -
Pdy3g03141 1006 SUPERFAMILY ARM repeat 1 854 IPR016024 -
Pdy3g03141 1006 PANTHER TRANSPORTIN 3 AND IMPORTIN 13 6 1002 IPR051345 GO:0005737(PANTHER)|GO:0006606(PANTHER)
Pdy3g03141 1006 Pfam Exportin 1-like protein 104 259 IPR013598 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy3g03141 K15436 transportin-3