Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy4g00091 | ATGGCGAATGCATCTTCTTCTTCTTGTGCTTACTCCCTTTTACCTCAACCTATTTCCCCCAATCGCCATTTGCCATTTAGATCTTCATTGTTTGCTTCATCTTTGCAGATTAATAATGGCTTCTCTTTCCGCCCTCTCAAGAAAACACCCTCTCTTCGAGTCCTCTCTATGCGACGTTCATCGAAAGCAACCTTGGTGACCGGGCAGTCGTGGAACACATCAGTTCTCGACAGCAAAACCCCAGTACTGGTCGAGTTCTACGCCAGTTGGTGCGGGCCATGCCAGATGGTGCACCGTGTGATTGACGAGATTGCAGCCGAGTATGCCGGGCGGGTCAAGTGTTTTGTGCTGAATGCTGACCAAGAACCACTAATAACAGAAGAATATGATGTCAAAGCCGTGCCCATTGTGCTTGTGTTCAACAACGGTGAGAAATGCGAGTCGGTGGTTGGAACCATGCCTAAAGAGTTCTATGTGGCTGCCATTGAAAGGGTCTTGTCATCTTCATCTTGA | 513 | 48.15 | MANASSSSCAYSLLPQPISPNRHLPFRSSLFASSLQINNGFSFRPLKKTPSLRVLSMRRSSKATLVTGQSWNTSVLDSKTPVLVEFYASWCGPCQMVHRVIDEIAAEYAGRVKCFVLNADQEPLITEEYDVKAVPIVLVFNNGEKCESVVGTMPKEFYVAAIERVLSSSS | 170 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy4g00091 | 170 | Gene3D | Glutaredoxin | 64 | 169 | - | - | |
| Pdy4g00091 | 170 | ProSiteProfiles | Thioredoxin domain profile. | 52 | 167 | IPR013766 | - | |
| Pdy4g00091 | 170 | Pfam | Thioredoxin | 65 | 162 | IPR013766 | - | |
| Pdy4g00091 | 170 | CDD | TRX-family | 74 | 163 | - | - | |
| Pdy4g00091 | 170 | ProSitePatterns | Thioredoxin family active site. | 83 | 101 | IPR017937 | - | |
| Pdy4g00091 | 170 | PANTHER | GEO12009P1 | 57 | 166 | - | GO:0005737(PANTHER)|GO:0015035(PANTHER) | |
| Pdy4g00091 | 170 | FunFam | Thioredoxin | 57 | 169 | - | - | |
| Pdy4g00091 | 170 | SUPERFAMILY | Thioredoxin-like | 54 | 167 | IPR036249 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy4g00091 | K03671 | thioredoxin |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 132575 | Pdy4g00091 | Pdy7g01557 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pdy | Pdy-Chr4:1751880 | Pdy4g00621 | Pdy-Chr4:11362371 | dispersed | |
| Pdy | Pdy-Chr4:1751880 | Pdy7g01557 | Pdy-Chr7:57519466 | wgd |