AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00117 ATGGCCCCTGCGAAGCCTACAGCTCGAGCGATCTCGCAACAAGCATTCGATGAAATGGTTAAAGAAAACATAGATGATTTAGGTATGGAACCAACAGAAGCCCTAAGCGACGCAATTGAAACACTAACCCTACAAGGCGTAGATCTCTCCGGTTTAGTCACCACTACTATCCCCGGAGAATCCAATCCCGTGATCCAATCTCTTGACAGAATCAAACAATTACAGAGCTCCGGTTGGACTGATGAAGCGGTTGTAGATGAGGCGATACCTTTGTTGAATGAATTGAGCGCAATGTCTCGTGTTGAAGGATCTGGAAATGCTGCAATTGCGTCGAGAAACGGCGGAGTAGAATTGATGTGTTCGGTTTGCTCGAAACTTAGCGTTGGTGGCCATGAGTTAGCACTCGTATCGGCTTTAGATGCACTGGTCGCCTTTCTTCTTCATGATCTTCAAAGTACAGAAACTTTTCGGCAGAGCGACGGACCAAAAATATTGATGGGTATCTTAACCGATAGAAGTCAATATGTGAATGTCCTGAACAGTGGCTTTTCGGTTGTTGCTGCTGCTGCAACTGGTAATGAGGTTCTTAAGGAATCTTTTGTGGAATTACACATAGATGAGTTAATAGTTACAATCATGAGGAAACATACTAAAGGAAGCATCCCCAGCTTATATGATGCTATTCGAGTGCTTTTAGCAGCTGATGATAACCGTGTAGTGGCTTCACAAGTTTATGGGTACGCCCGACAATTTGCAAAGATTGGAATTGCTGAAGCTCTTGTGAAGTCACTTGAAGACGGGGTTCGCACACCAAATCTGGTATCAGCAACTATTGCGTTAAAAGCTGTTGCAGTGAATGATGATATATGCAAATCGGTTGCTGAAAACGGTGGTATAGATTCATTGCTCATTTGTATTGATGAATCTGGTATACAGGGGAATGAAATTGTGGCTAAAGCTTGCTGCTCCTTGTTATCAAAGTTGGCAGGAAGTGATTTTAACAAGAGTGCTATAGTTGAAAAGGGAGGTTTGAACAGGCTCCTTACACTTTGTAGCAGACTCGCTGACGAACCTTCTGTTATTCAGGAGGTGATGACTATCATTTGTACCTTATGCCTGCGATCACCTGGAAATGCATCATTGGCCATGGAAGCTGGAGCAGGAGATCTTGCTATACAAGCTATGAAGAAATTCCCTCAAGCTTCTCAGCTGCAGAAAAATGCGTGTCTCATGATCCGTAATCTTGTTGCCAGGAATCCAGAAAACAGGTCTCTTTTGTTGAGTAATGGTATTGAGAAGATCATAAGGAATGCTAAGGAAAGCCATAAAGGCTGCAGAGATGCAGCCACTGCTGCCCTTAGAGACTTGGGGCTTGAAAATTACAACTCATAG 1392 43.53 MAPAKPTARAISQQAFDEMVKENIDDLGMEPTEALSDAIETLTLQGVDLSGLVTTTIPGESNPVIQSLDRIKQLQSSGWTDEAVVDEAIPLLNELSAMSRVEGSGNAAIASRNGGVELMCSVCSKLSVGGHELALVSALDALVAFLLHDLQSTETFRQSDGPKILMGILTDRSQYVNVLNSGFSVVAAAATGNEVLKESFVELHIDELIVTIMRKHTKGSIPSLYDAIRVLLAADDNRVVASQVYGYARQFAKIGIAEALVKSLEDGVRTPNLVSATIALKAVAVNDDICKSVAENGGIDSLLICIDESGIQGNEIVAKACCSLLSKLAGSDFNKSAIVEKGGLNRLLTLCSRLADEPSVIQEVMTIICTLCLRSPGNASLAMEAGAGDLAIQAMKKFPQASQLQKNACLMIRNLVARNPENRSLLLSNGIEKIIRNAKESHKGCRDAATAALRDLGLENYNS 463
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00117 463 PANTHER UNCHARACTERIZED 5 457 - -
Pdy4g00117 463 SMART arm-5 375 417 IPR000225 GO:0005515(InterPro)
Pdy4g00117 463 SMART arm-5 331 373 IPR000225 GO:0005515(InterPro)
Pdy4g00117 463 SMART arm-5 286 330 IPR000225 GO:0005515(InterPro)
Pdy4g00117 463 SUPERFAMILY ARM repeat 74 455 IPR016024 -
Pdy4g00117 463 Gene3D - 65 242 IPR011989 -
Pdy4g00117 463 Gene3D - 243 460 IPR011989 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00117 K24166 armadillo repeat-containing protein 6