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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00126 ATGATGATAAGATCAGTGCCTTGTCAAGCTCCATCCGTGTTCCGGCCGCGGTTAGCTCCGGCGTCGACGACGATCTGTTGTTCTTCCAGAAACAATGCCTATATACCTAAACTTGCACCTTTTAGCCGAAGCAAGCTCGATAGAATGGTTAAGGATCCTCCGTTAATCCAGAAATCGGAAAACGATTTAGCAGATTACTGTTCAACGTTGGAAGGAGATCCATCCTACAGCTGCTGGAGAGCTTATTTCGAGCTCAAAGATCTCGAGAAAGAAGCTCCAAAAGAAGTGGTGGAGAGGGTGATACTAGAATCAGGAGGGGTGAAATCACTAATCGGATGCCTGCACGGAATCTCTGAAATTCACAAGGCAAAAAAGCTATCAGAACATGAACAACAGAACACGAATACTTTAAACTCGGAGAACAAACCTGCGATTAAATCCACAAGAGCCTCATGTCCTATACCGGATGGACTCCCAAAGAGCCGGGAAGAGATGGAGGAAGAAGAGAAAGGAAAAATGCCCGACTCGCCTTTCACAAGATTGCTTCGCTCGAAAGGAAGGTTCCCAGCTTGGTACTCCCCTGCTCCTGATCATGAAACTTGA 603 46.43 MMIRSVPCQAPSVFRPRLAPASTTICCSSRNNAYIPKLAPFSRSKLDRMVKDPPLIQKSENDLADYCSTLEGDPSYSCWRAYFELKDLEKEAPKEVVERVILESGGVKSLIGCLHGISEIHKAKKLSEHEQQNTNTLNSENKPAIKSTRASCPIPDGLPKSREEMEEEEKGKMPDSPFTRLLRSKGRFPAWYSPAPDHET 200
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00126 200 MobiDBLite consensus disorder prediction 159 176 - -
Pdy4g00126 200 PANTHER CCG-BINDING PROTEIN 1 18 200 IPR037502 GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0010183(InterPro)|GO:0036033(PANTHER)|GO:0036033(InterPro)
Pdy4g00126 200 MobiDBLite consensus disorder prediction 125 180 - -
Pdy4g00126 200 MobiDBLite consensus disorder prediction 130 146 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00126 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
132590 Pdy4g00126 Pdy7g01591
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr4:2134936 Pdy7g01591 Pdy-Chr7:58137637 wgd