AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00129 ATGAGTGCAATGAAGATCATTTTTCAGGCAGTAATAATAATGACAAGGTTGATCATCACCGTCCATTCTCTGGACACTAACAACGTCTTCGACCCATGTTCAGATACCAAAGTTCAAAGATGGGATGGATTTACCTTCGGCCTCGCCTTTTCTTCAAAGGATTCTTTTTTCTCTGACCAAATCCAGCTTTCACCCTGTGATCGCCGCCTCTCCCTTGGTGGAACCGCCGCTCGCCTTGCCGTTTTCCGGCCAAAAGTCGACGAGCTCACTTTTCTTACCGTTAATGTCTCCGACTTTGATCCGGCGAAATCGGGTGGATATATGGTTGCATTTGCTGGGAGACAATATGCAGCAAGATCAATACCTGCTTTAGTTGCTGATAAATCCAATATCATCACAAGTTTCACTCTGGTTCTTGAATTTCAAGAAGGCAGACTTGTAAACTTATACTGGAAAAAATTTGGGTGTAAATCATCATGCACAGAAAGATCTGGGATTTGTCTCGACTATCAAGAATGTGCAACACCTATGTCAAAATGCAAGACGAATGGCGGGTCGGTTGACTGTAATATTAGCGTGCAGTTAACGTTCTCAGGAACAGACAAGACACTAGAAGCACTTAACTCATGGTACGAGGTTGAAAAACTAAGACAATATTCGCTAGTCGATTTGTACCAAGACATAAATGATATGGTTGATATTGGTCAATAA 711 42.19 MSAMKIIFQAVIIMTRLIITVHSLDTNNVFDPCSDTKVQRWDGFTFGLAFSSKDSFFSDQIQLSPCDRRLSLGGTAARLAVFRPKVDELTFLTVNVSDFDPAKSGGYMVAFAGRQYAARSIPALVADKSNIITSFTLVLEFQEGRLVNLYWKKFGCKSSCTERSGICLDYQECATPMSKCKTNGGSVDCNISVQLTFSGTDKTLEALNSWYEVEKLRQYSLVDLYQDINDMVDIGQ 236
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00129 236 PANTHER DPH3 HOMOLOG-RELATED 17 229 - GO:0005829(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00129 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr2:109647928 Pdy4g00129 Pdy-Chr4:2158124 dispersed
Pdy Pdy-Chr4:2158124 Pdy1g00180 Pdy-Chr1:3848863 transposed