Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pdy4g00148	ATGGAGGAAGTACCAGGATCCACGGGCACGAGTGCGGGGTTTGCTCTGCGCCTCGGTCAAACCACCTTCTCCTCAGCTTCTCTTCTTGTTATGTCTTTTGGTGTTCAGTTCTACAGCTATACATCCTTCTGCTTCTTGGTGACTATTATGGGTTTGGTTATTCCATGGAGTTTCACATTGGCACTGATTGATGGATACTCGGTTCTTGTAACATGCCCAATTCGCCAAAAGGGAATACTGCTTATTATTGTTATAGGGGATTGGATGCTATCAACTCTTACGCTAGGTGCTGCCTCTTCGGCCGCCAGTGTGGTGGATATCTTGCTGGTGGCTGATGGATCGGTCTGCCATCCAAGAATATGTAGCAGATACCTACTTTCTACTGTATTTGCTTTCTTGTCATGGTTCTTGTCTATGGCTTCCTTTCTATTCAATCTATGGATTCTTCCATCCTTATGA	459	45.32	MEEVPGSTGTSAGFALRLGQTTFSSASLLVMSFGVQFYSYTSFCFLVTIMGLVIPWSFTLALIDGYSVLVTCPIRQKGILLIIVIGDWMLSTLTLGAASSAASVVDILLVADGSVCHPRICSRYLLSTVFAFLSWFLSMASFLFNLWILPSL	152

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pdy4g00148	152	PANTHER	CASP-LIKE PROTEIN 5B3	1	151	IPR045009	GO:0016020(PANTHER)
	Pdy4g00148	152	Pfam	Casparian strip membrane protein domain	8	137	IPR006702	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pdy4g00148	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pdy	Pdy-Chr4:2375393	Pdy6g02323	Pdy-Chr6:62274599	dispersed
	Pdy	Pdy-Chr4:2372986	Pdy4g00148	Pdy-Chr4:2375393	tandem