Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pdy4g00191	ATGTTGCCTAATTTCATACCCTTTAGAGGCATGAAATCAAAAATTGTTCCTTACTATATGAATGGAAATCCATCGAGCCTTTTTTGCATTCTGCCAAGAGACGATTCATCACGCTTTTATCCTCCTGGAACCGCTCCTGTTTACCTTAATGTGTATGACATCTCTACTATCAACCCTTTTATATCCTGGACGGGCCTAGGTGCTTTTCATACGGGTGTGGAAGTTCATGGTGTGGAATATGGTTTTGGATGTCACCAAGAATCAGAAAGTGGCGTGTTTGAAACCGAGCCTAGGAAATGCCCTGGATTTATCTTTAAGGAGTCGATTTTAATGGGCACAACAAAGTTAACCCCAACCCAAGTTCAAAGATTCATTGAGCTTCAATCTAATAACTACTATGGTGACACCTACCACTTGTTTGGGAAGAACTGCAATCATTTTTGTGAAGATATGTGTTACAAAATAACAGGGAACAAAATCCCTAGTTGGGTCAACCGGCTAGCCAGGATAGGTTCATGTTGTCGTTGCATTCTTCCAAAAGCCATCAAGGGATCTGCTGTTAAGAATCAATCAAACTCTTCAGACTATGAAAAAAAGAGTTTGAAAAACTTTACTTGTTTCACTTCATTTTCAACACATAGTAAGTTGAGGAAGGTGTCGATATCTTCATTGTATAAGCATTCGCTATACAAAGGATGTCTACCTCCATGGGAGTTGCAAGTCGACTCACAAAGACTTTGCGACGATGAGTAA	753	39.84	MLPNFIPFRGMKSKIVPYYMNGNPSSLFCILPRDDSSRFYPPGTAPVYLNVYDISTINPFISWTGLGAFHTGVEVHGVEYGFGCHQESESGVFETEPRKCPGFIFKESILMGTTKLTPTQVQRFIELQSNNYYGDTYHLFGKNCNHFCEDMCYKITGNKIPSWVNRLARIGSCCRCILPKAIKGSAVKNQSNSSDYEKKSLKNFTCFTSFSTHSKLRKVSISSLYKHSLYKGCLPPWELQVDSQRLCDDE	250

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pdy4g00191	250	Pfam	PPPDE putative peptidase domain	46	180	IPR008580	GO:0008233(InterPro)
	Pdy4g00191	250	Gene3D	PPPDE domains	41	199	IPR042266	-
	Pdy4g00191	250	SMART	DUF862-2a	45	183	IPR008580	GO:0008233(InterPro)
	Pdy4g00191	250	PANTHER	DESUMOYLATING ISOPEPTIDASE	44	198	IPR008580	GO:0008233(InterPro)\|GO:0016579(PANTHER)\|GO:0070646(PANTHER)\|GO:0101005(PANTHER)
	Pdy4g00191	250	ProSiteProfiles	PPPDE domain profile.	45	182	IPR008580	GO:0008233(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pdy4g00191	K22763	deubiquitinase DESI2 [EC:3.4.19.12]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pdy	Pdy-Chr3:21082682	Pdy4g00191	Pdy-Chr4:4139647	dispersed
	Pdy	Pdy-Chr4:4139647	Pdy5g00819	Pdy-Chr5:14334422	dispersed
	Pdy	Pdy-Chr4:4139647	Pdy6g02993	Pdy-Chr6:71416832	transposed