Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy4g00195 | ATGTTGATACTGGACTACCGGAGTAGCACAATTTCTTCAGGGGATTTGTTCAAAGGCAGCATGGACAGTCAATTTCGTAAAGAACAACAAAATCAGGTAGAAGTAGGTGAAGCAGAGGCCGTTATAATTGGGGGTATGGTGTTAGATATACACGCCACTCCTTCATTTCCCCCAAACCCTAGAACTACAACCCCCGGCAAGGTGCGGTATGCAGCAGGAGGTGTGGCAAGAAACATTGCCGAGTGTGTATCAAAGCTCGGAACAAAGCCTTGCATTATAAGTGCATTAGGATTGGACATGGCAGGGAATTTGCTATTGGAGTACTGGAAGTCTGCAGGATTACCGTTAGAAGGTATTCGAATGAGCCATGATATAGAGACTCCAGTTGTATGCATTGTCTTTGATACCGAAGGAGAATCTGCTGCTGCTGTTGCAAGTGTCGAATCATTTGAACGGTTTCTTACACCCGCTTGGATTAAAAAATTCAAATCTAATATAACATCTGCTCCTATTGTGATGATTGATGCAAACTTAAGTCCGCCAGCTCTGGAAGCATCTTTTCAGCTGGCTGTGGAGGTTGGTACCCCAGTTTGGTTTGAGCCCGTATCTGTAGCAAAATCAAAAAGAGTTGTTTCAATTGCCAAGTATGTAACATTTGCTTCCCCTAATGAAGACGAACTGATTGCGATGGCAAATGCTCTATCTTACAAACACACGTTCTCTCCAATTCAAAAGGATAGCAAAGACACAATATCATTTCTATTTCAACAACTAAAACCCGCAATCTGGATTTTGCTTGAAAATGGCATTAAAGTCATCGTTCTAACCCTTGGTTCAAAAGGGGTATTGTTATGCTCTAAAGGGCGCCTTGATTTTCAACATATCGGGCCAAAAAGAAACAATACTTCACACGATATTGGCAAACGGCTGCACGAAACCATAAATCAAGTTTGCCCACCGGACCGGTTTTTTAGTGCATTAAGGCTTGAAGAAAGCTCTAGTAGCAGCCCATATGTGGTGCATTTTCCATCTGTATCATGTGCATCTGTTGCGAGGTTAACGGGAGCTGGTGACTGTTTGGTTGGTGGCTCGATTGCTTCAATTTGTGCAGGTTTAGATGTTATGCAAAGTATTGCAGTTGGAATTGCAGCTGCTAAAGCTGCTGTTGAAGCGGAGACAAATGTACCTTCCGGGTATAGTTTGGATCAAATTGCAGCCGATGCAAGATCTGTGTACATGGGTGCCAAGGTTGTTTTTTGTCAATCGATGTTATAA | 1275 | 42.82 | MLILDYRSSTISSGDLFKGSMDSQFRKEQQNQVEVGEAEAVIIGGMVLDIHATPSFPPNPRTTTPGKVRYAAGGVARNIAECVSKLGTKPCIISALGLDMAGNLLLEYWKSAGLPLEGIRMSHDIETPVVCIVFDTEGESAAAVASVESFERFLTPAWIKKFKSNITSAPIVMIDANLSPPALEASFQLAVEVGTPVWFEPVSVAKSKRVVSIAKYVTFASPNEDELIAMANALSYKHTFSPIQKDSKDTISFLFQQLKPAIWILLENGIKVIVLTLGSKGVLLCSKGRLDFQHIGPKRNNTSHDIGKRLHETINQVCPPDRFFSALRLEESSSSSPYVVHFPSVSCASVARLTGAGDCLVGGSIASICAGLDVMQSIAVGIAAAKAAVEAETNVPSGYSLDQIAADARSVYMGAKVVFCQSML | 424 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy4g00195 | 424 | PRINTS | Ribokinase signature | 212 | 227 | IPR002139 | GO:0016301(InterPro) | |
| Pdy4g00195 | 424 | PRINTS | Ribokinase signature | 273 | 284 | IPR002139 | GO:0016301(InterPro) | |
| Pdy4g00195 | 424 | PRINTS | Ribokinase signature | 42 | 63 | IPR002139 | GO:0016301(InterPro) | |
| Pdy4g00195 | 424 | Gene3D | - | 36 | 416 | IPR029056 | - | |
| Pdy4g00195 | 424 | ProSitePatterns | pfkB family of carbohydrate kinases signature 1. | 73 | 97 | IPR002173 | GO:0016301(InterPro) | |
| Pdy4g00195 | 424 | SUPERFAMILY | Ribokinase-like | 40 | 396 | IPR029056 | - | |
| Pdy4g00195 | 424 | PANTHER | ZGC:136858 | 30 | 406 | - | - | |
| Pdy4g00195 | 424 | CDD | YeiC-kinase-like | 41 | 377 | - | - | |
| Pdy4g00195 | 424 | Pfam | pfkB family carbohydrate kinase | 40 | 289 | IPR011611 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy4g00195 | - | - |