Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pdy4g00243	ATGGCTAAACTATCTGTTGTTCTCTCTTCAATCCTTTTCCTCATTTTCCTTCTCGCTATCTCAGAAATCGCGATGGTGAACGGAAAATTATGTGAAAGGCCAAGCAAAACTTATTCAGGAAAGTGTGATAACAAGCAGTGCGACAAGAAGTGTAAAGACTGGGAGAAGGCAACTCATGGAGCTTGTCACTCCCGTGAAGCCAAGTCTGGTTGCTACTGCTACTTCGACTGTGCAAAGACACCGCCACCTTCCAAGGACAAATCGCCTTCTCCTCCCAAAGGCGGTGGCTCATCGCCCCCACCTGTTGGTAGTGGTTCCCCACCTCCTCCTAGTGGAGGAGGTGGTGGAGGGTCGACGTCACCTCCTTCGGACGGCGGGTCATCTCCTCCTGGTGGTGGCGGCGGCGGTGGCGGTGGTGGAGGAGGCGGTGGCGGTGACGGTGGTGGTGGAGGTGGTGGCGGTGGTGGTGGTGGCGGCAGTGGAGGTTCATCGCCACCTTCAGATGGCGGGTCAGGAGGTGGTGGAGGTAATGGAGGGTCGTCCCCACCTGCAGATGGCGGATTGCCACCTCCTCCGAACCCATGTCAGAGGATAGCCTAA	600	56.67	MAKLSVVLSSILFLIFLLAISEIAMVNGKLCERPSKTYSGKCDNKQCDKKCKDWEKATHGACHSREAKSGCYCYFDCAKTPPPSKDKSPSPPKGGGSSPPPVGSGSPPPPSGGGGGGSTSPPSDGGSSPPGGGGGGGGGGGGGGGDGGGGGGGGGGGGGSGGSSPPSDGGSGGGGGNGGSSPPADGGLPPPPNPCQRIA	199

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pdy4g00243	199	PANTHER	DEFENSIN-LIKE PROTEIN 1	1	77	-	GO:0006952(PANTHER)
	Pdy4g00243	199	MobiDBLite	consensus disorder prediction	84	108	-	-
	Pdy4g00243	199	SMART	gth-4	30	77	IPR003614	GO:0006952(InterPro)
	Pdy4g00243	199	MobiDBLite	consensus disorder prediction	184	199	-	-
	Pdy4g00243	199	Pfam	Gamma-thionin family	29	77	-	-
	Pdy4g00243	199	PRINTS	Eggshell protein signature	39	50	-	-
	Pdy4g00243	199	PRINTS	Eggshell protein signature	9	25	-	-
	Pdy4g00243	199	PRINTS	Eggshell protein signature	139	149	-	-
	Pdy4g00243	199	PRINTS	Eggshell protein signature	113	128	-	-
	Pdy4g00243	199	PRINTS	Eggshell protein signature	168	186	-	-
	Pdy4g00243	199	MobiDBLite	consensus disorder prediction	82	199	-	-
	Pdy4g00243	199	Gene3D	-	27	77	IPR036574	-
	Pdy4g00243	199	SUPERFAMILY	Scorpion toxin-like	29	77	IPR036574	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pdy4g00243	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pdy	Pdy-Chr4:4972470	Pdy4g00243	Pdy-Chr4:5016622	dispersed
	Pdy	Pdy-Chr4:5016622	Pdy4g00246	Pdy-Chr4:5061265	dispersed
	Pdy	Pdy-Chr4:5016622	Pdy4g00245	Pdy-Chr4:5043418	proximal

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pdy1g04980	.	4	77	Plant Defensins gene family	AT2G02100	55.263	1.06e-26	91.3
	Pdy4g00235	.	13	78	Plant Defensins gene family	AT1G19610	54.545	8.96e-22	80.1
	Pdy4g00240	.	3	78	Plant Defensins gene family	AT1G19610	48.684	2.19e-20	78.6
	Pdy4g00241	.	6	78	Plant Defensins gene family	AT1G19610	44.0	3.35e-17	69.3
	Pdy4g00243	.	6	78	Plant Defensins gene family	AT1G19610	49.315	4.73e-21	81.3
	Pdy4g00245	.	3	78	Plant Defensins gene family	AT1G19610	55.263	1.67e-25	90.1
	Pdy4g00246	.	3	78	Plant Defensins gene family	AT1G19610	55.263	1.67e-25	90.1