AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00248 ATGAATTCATATTCAATCGATATCAAAACCGAAAAAGCCAACGCGATTTTCCGGCAACACAGACTTCAGCAGATCACGACGGTGTTCCGATTCATGGAGATGATCGTTTTTCTAATTCTGATTTCAAGGTTTTCCTCTCATTTTAAAATATCTACAGATCATCTCAGAGGAATCTCGTTCGCGTCTTTTAGCCCTAGGGTTGTTTTCGTGATCGGAAACCTGATCATATTAATCCTGTTGTTCAAATCTCGATCTGTTGAAGATGACGATCGAGACTTAAAATTAGACGTAAGAATGCGTGATAGTGCTGGTACTGCTCGAAGTGAAGAAAGGAAGATTTGCAGGAGTCAATCGGAGAAGGTAATGAGAGTGGCACGCCAAGACGATCAAACTCACCGGAAACTGAGGCGGACGGTGACAGAGAAAAGAACGTCGGAGATGATTGATTGCGGTGGCGGTGAGACGGTGGTGGCAGCGACAACGGCGAAGGATGAACTTAGCAGCGAAGAATTCCGGCGAAGGGTGGAGGCGTTTATTTTGAGGCAACAACAATGTCTTAGAGATGAAGAGTTTGCTACATGA 582 44.5 MNSYSIDIKTEKANAIFRQHRLQQITTVFRFMEMIVFLILISRFSSHFKISTDHLRGISFASFSPRVVFVIGNLIILILLFKSRSVEDDDRDLKLDVRMRDSAGTARSEERKICRSQSEKVMRVARQDDQTHRKLRRTVTEKRTSEMIDCGGGETVVAATTAKDELSSEEFRRRVEAFILRQQQCLRDEEFAT 193
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00248 193 PANTHER TRANSMEMBRANE PROTEIN 7 192 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00248 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
132603 Pdy4g00248 Pdy9g01705
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr1:116052593 Pdy4g00248 Pdy-Chr4:5103984 dispersed
Pdy Pdy-Chr4:5103984 Pdy5g00907 Pdy-Chr5:17242930 dispersed
Pdy Pdy-Chr4:5103984 Pdy9g01705 Pdy-Chr9:39973451 wgd