AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00269 ATGGCCAACAAATCTGTGGTTGTGGCTTCATCATTCACCGAAGAAGCCTTCGAATCCATCATCGTTGACGTCTCCGACTCCGATTCCGATTCCGGTTCGTGGCAGGTTATCGATCCGTCTGATTCCGATGACGGGAACTTCTCTTACGGTGACGTCACCACCACCGACGACGAAGACGACGTGGCGGATGTAGAAGATCTCCTACAACATCCTTACGGATCTCCGTTGTCTGATATATCTATGCAGTCTATGGGAGATCAGATCGCTCGTCAGTATCAGGAACTTAAAGACGCCTACGAAACCGGTCACCACCGTCAGATAATTGCTGACGACGAAGCCGTGGCGGATGTCGATGATATCCTTCAAAATCCTTACGGATCTCCGTCGTACGATGAACTTCAACATTCATATGAAATCGATCAACGCCATGAGATAATCAGTGGCAACGAAGTCGTGGCGGATGTCGATAAGATCATTCATCACTTTGAGGAACTTAAACACGCAAATGAAACCGATCACCAGCGTGATATAATAGGCGACACCGCCGCCGTGAAAGATGGTGGTTCGATCGGCGCTGCAGATGATCTAAACTACGACGATGATGAAAATGATGATTCGGAATTAAACGACGAACTGGTGCCCAAATGGTTGAATCATAAATTCGAACGGCAGAGAATGAGGAAATTAGGGAAGAAGGGGAAGAAATCAAAACGGATGGCTTACCAAAACAACAGACCTGGGTGTGTTCATGGGAAGCATGGTTTAGGATTGAAGCACAATCTCATCTGGTAA 792 47.1 MANKSVVVASSFTEEAFESIIVDVSDSDSDSGSWQVIDPSDSDDGNFSYGDVTTTDDEDDVADVEDLLQHPYGSPLSDISMQSMGDQIARQYQELKDAYETGHHRQIIADDEAVADVDDILQNPYGSPSYDELQHSYEIDQRHEIISGNEVVADVDKIIHHFEELKHANETDHQRDIIGDTAAVKDGGSIGAADDLNYDDDENDDSELNDELVPKWLNHKFERQRMRKLGKKGKKSKRMAYQNNRPGCVHGKHGLGLKHNLIW 263
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00269 263 PANTHER VID27-LIKE PROTEIN 1 260 - -
Pdy4g00269 263 MobiDBLite consensus disorder prediction 25 57 - -
Pdy4g00269 263 MobiDBLite consensus disorder prediction 25 52 - -
Pdy4g00269 263 MobiDBLite consensus disorder prediction 228 247 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00269 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr4:5577395 Pdy4g00269 Pdy-Chr4:5588462 proximal