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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00295 ATGATTTACCTGTTTTTCGCGGTTTTATTCGTCGAAATGTTGACGATTCTGTTACTTTTGTTCAAAACCCCACTCCGAAAGCTTTTGATAATCGGCATAGATCGTGCGAAACGAGGAAGAGCTCCGTTGGTTGTAAAATCCGTCGGCGCCACCGTCTTCGTAATCATGATGTACAACGTTTACAGCGTAACGGAAATCCAGAGCCGGCCGGCCGACGCCCTTAATCCCACCGATCAAATCATCCTCGCTTACCACATGCTTGAAGCTTCTCTCATGGGATTTTCGCTTTTCCTATCACTAATGATAGATAGGCTGCATCACTACATAAGAGAACTACGTATGCTCAGAAAAACAATGGAGGCTGCAAAGAAACAAAACCGGGCAGCAGAAGAAACAAAGAACAAAGGTGCAGATGAAGTTAAAATCCTGAATGATGAAATGTCTAAACTGAAAGCAGAGATGAAGAAACTGGAATCTGAATATGCAACAAAGGAAAAAGAGGTTAAATCAGCAGAAGCTAATTCGGTTGCTCTTAAGAACCAATCCGAAGGGTTTCTTCTGGAATATGATCGCTTGTTAGCGGAAAACCAGAGTCTTAGAGATCAACTACGCTCCATTGATGAAAGTGTGTCTCATTCCAATGGAAAGAAGAATTTGTGA 660 42.27 MIYLFFAVLFVEMLTILLLLFKTPLRKLLIIGIDRAKRGRAPLVVKSVGATVFVIMMYNVYSVTEIQSRPADALNPTDQIILAYHMLEASLMGFSLFLSLMIDRLHHYIRELRMLRKTMEAAKKQNRAAEETKNKGADEVKILNDEMSKLKAEMKKLESEYATKEKEVKSAEANSVALKNQSEGFLLEYDRLLAENQSLRDQLRSIDESVSHSNGKKNL 219
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00295 219 Coils Coil 105 181 - -
Pdy4g00295 219 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 200 IPR008417 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER)
Pdy4g00295 219 Coils Coil 189 209 - -
Pdy4g00295 219 FunFam B-cell receptor-associated protein 29 136 199 - -
Pdy4g00295 219 Gene3D - 136 199 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00295 K14009 B-cell receptor-associated protein 31
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Event-related genes

Select Gene_1 Gene_2 Event_name
132619 Pdy4g00295 Pdy7g02641
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr4:6128305 Pdy9g02063 Pdy-Chr9:44367463 dispersed
Pdy Pdy-Chr4:6128305 Pdy4g04536 Pdy-Chr4:97882492 wgd
Pdy Pdy-Chr4:6128305 Pdy7g02641 Pdy-Chr7:73005993 wgd