Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pdy4g00317	ATGGATTTTGAGTTGAGAAGAGCGAGAGAGAAATTGGAGAAAGAACAGAAGGATAGAAAAGAGAAGGCGAGGTTAAGATTGGAAAGAGAAAGAAAAGCCAAACAAGAAGCTATGCGTCAGCGTGAGGCGATTGAGGCTGCTCAGAGGTCTCGTAGAATCGATGCCATGGAAGCCCAGCTTAAGGCGGAGCAGCAAATGGAAGAAAGTATATTTGCTGGCAGAGGAATTTCTTTTAATCGTGTTTTAGAAGCTGTACCTTTTGAGGGTGCTGGAGATAAGATCAAACTCCCACCTTCTTGTTTCAATGAATTATCCGAGCAAGGTGCTTTTGACAAAGGTCCCCTTCATTTCCAGTTATCAGTAGTTCACCAAGATAAGTCAACCCATGGGTCAACCCATGCCGGGGTCTTGGAATTCACTGCTGACGAAGGTTCTGTTGGGATCCCGCCTCACATTTGGAATAACCTATACTCTAAACAGGACCCAATGACTCCTTTAATTGAAGTAAAATACGTGTGGTTAGCAAAAGGAACATATGCAAAGCTTCAATCAGAAGAACTCGGGTTTTCAGACATACCCAACCACAAAGCCGTCCTTGAAACAACTCTTCGCCAACATGCAACTCTTTCTCAAGATGATGTTTTAACTGTCAAACATGGTGTCTTGACTTACCACCTACGTGTTCTTGAACTAAAACCCTCAGAGAGTGTATCCGTTCTTGAAACAGATATTGAAGTTGACATTATGGGTCCTGATTCACTTCCCGAAAAGAACAACCAACATGTATTGAGACCACTAACTTTTGGGAAATCTGAATCTGGTGTTATAAATGAAGGAGAATACGTTTATTACAAGTTTTCAATAGATGATGACATGTGGGGTAGAATTACCTCTGGGGATTCTGAAATTGAATTAAAGTTAGATTCAGAAGCAAAAGACGGAGATACAGATCTTTATCTTTCAAAACACCCGCTCTTGTTTCCAAACACACACCAACACGGTTGGTCAAGCCATGATGTGGGTTCAAAGTGTCTGGTTCTTGGCTCAAAGGACCAGAGCTTGGGTGTTGGTACCTATAGTGTTGGTGTATATGGGTTTAAAGGAACCACGAAATACCATGTTTTAGTAACCATTCAAGATACCTCTAACTCAAAGGTTGGTCAACAACCCGTGTCCTCTTCTCATGGGTCAACAGCAGATACTATTGAGTGCAGCAATTGCAAACATTATATACCCTTGAGAACCATAGCACTTCATGAGGCTTATTGCAGAAGACACAATGTCATATGTACTCATGATGGTTGTGGGGTTGTTCTTAGGGCTGAAGAGGTCAAGAACCATGTACATTGTGAGAAATGCGGGCTTGCTTTCCATAGTGGGGAGATTGAAAAACATATGAAAGTGTTCCATGAGCCGCTTTGTTGTCCGTGTGGGGTCATCCTTGAGAAGACACAGATGGTGCAACACCAATCCTCAGAGTGTGCCTTACGCCTTGTAACATGCCGGTTTTGTGGGGATATGGTCCAAGCTGGTGCTTTAGCCGTTGACACACGAGATCGCTTAAGAGGGCTCTCTGAGCACGAGAGTCTTTGTGGGTCAAGAACCGCCCCGTGTGACTCGTGTGGTAGAGCAGTGATGTTGAAAGAAATGGATATTCATCAGGTAGCTGTCCATCAGAAGAATTGA	1686	43.3	MDFELRRAREKLEKEQKDRKEKARLRLERERKAKQEAMRQREAIEAAQRSRRIDAMEAQLKAEQQMEESIFAGRGISFNRVLEAVPFEGAGDKIKLPPSCFNELSEQGAFDKGPLHFQLSVVHQDKSTHGSTHAGVLEFTADEGSVGIPPHIWNNLYSKQDPMTPLIEVKYVWLAKGTYAKLQSEELGFSDIPNHKAVLETTLRQHATLSQDDVLTVKHGVLTYHLRVLELKPSESVSVLETDIEVDIMGPDSLPEKNNQHVLRPLTFGKSESGVINEGEYVYYKFSIDDDMWGRITSGDSEIELKLDSEAKDGDTDLYLSKHPLLFPNTHQHGWSSHDVGSKCLVLGSKDQSLGVGTYSVGVYGFKGTTKYHVLVTIQDTSNSKVGQQPVSSSHGSTADTIECSNCKHYIPLRTIALHEAYCRRHNVICTHDGCGVVLRAEEVKNHVHCEKCGLAFHSGEIEKHMKVFHEPLCCPCGVILEKTQMVQHQSSECALRLVTCRFCGDMVQAGALAVDTRDRLRGLSEHESLCGSRTAPCDSCGRAVMLKEMDIHQVAVHQKN	561

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pdy4g00317	561	Gene3D	-	270	384	-	-
	Pdy4g00317	561	SUPERFAMILY	TRAF domain-like	402	449	-	-
	Pdy4g00317	561	Gene3D	Zinc-RING finger domain, C3HC4 (zinc finger)	469	518	IPR013083	-
	Pdy4g00317	561	Pfam	TRAFD1-XAF1, zinc finger	524	553	IPR049439	-
	Pdy4g00317	561	Coils	Coil	5	66	-	-
	Pdy4g00317	561	PANTHER	UBIQUITIN FUSION DEGRADATON PROTEIN 1	1	533	IPR004854	GO:0006511(InterPro)\|GO:0030433(PANTHER)\|GO:0031593(PANTHER)\|GO:0034098(PANTHER)\|GO:0071712(PANTHER)
	Pdy4g00317	561	Gene3D	-	176	249	-	-
	Pdy4g00317	561	Gene3D	-	76	174	IPR042299	-
	Pdy4g00317	561	Pfam	Ubiquitin fusion degradation protein UFD1	90	251	IPR004854	GO:0006511(InterPro)
	Pdy4g00317	561	MobiDBLite	consensus disorder prediction	1	24	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pdy4g00317	K14016	ubiquitin fusion degradation protein 1