Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pdy4g00319	ATGTCCCAGATGAAATTTCCTGCGGAGTTCGTCGGATTCAACTCGATGGCATCTTCTTCGTCTTCATGGTGGCAGTCACTCTTCTCTCCGGCCAAGAATCCCTTTACTGCTCACTGCTTTAAACGCCTCCAAGAATACGCCATTAAAGCCAAAGTTAAGGTGATGAGATCATCAAAAGAGAAGAACGAGTTAGCAAGTCTTAAGGAGTTGGAGAAGATATTAGGGTATAAATTCAAGAAAAAGTTATTGTTGCAACAAGCTTTTACACATCCGAGTTATCAAGGATCTGAATCCTATGAAAGACTCGAGTATGTTGGTGATTCCATTCTCAGTTTTCTAATCAGCAGACAACATTTCTTTATGTACCCGAATCTCCCACCAGGATCACTAACTGCTCTTCGAGCAGCCAATGTTGACACAGAGAAGCTTGCACGCGTTGCAGTTAAATATAACTTCCATAACTACCTAAGACACGAAAATCCAATGCTTAGTAAGCAAATTCGGATATTCATGAGAGCTCTTGAAAAGTATCCATTTCATTCATATGGATTAATTGATGCTCCAAAGACTTTAGCTGATATTGTTGAATCCACAATAGGGGCCATCTATGTAGACAGCAACTCTTCAATCGATACCACGTGGGAGGTTGCTAAGATTCTACTCGAGCCAATGATCACTCCTGAAATGCTCCAACAGAATCCCGTAAGGAAGCTGAATGAACTCGGTCACAAAAAGAAGCTAAAGATTCGATTTCGGGATAAATGGTTAAAAGAAGGTGTTTATGAGGTATTTATCAATAATCAACTTAAAGGAAAAGGTGAATACAAAGCCAAGAAGGAAATTGCACTCAACAGAGCAGCTCAGGATGCATGTGACAAAATTTTGAACAATATGAATGCTAAAAACAACATATCTGAAAGTTGA	924	39.5	MSQMKFPAEFVGFNSMASSSSSWWQSLFSPAKNPFTAHCFKRLQEYAIKAKVKVMRSSKEKNELASLKELEKILGYKFKKKLLLQQAFTHPSYQGSESYERLEYVGDSILSFLISRQHFFMYPNLPPGSLTALRAANVDTEKLARVAVKYNFHNYLRHENPMLSKQIRIFMRALEKYPFHSYGLIDAPKTLADIVESTIGAIYVDSNSSIDTTWEVAKILLEPMITPEMLQQNPVRKLNELGHKKKLKIRFRDKWLKEGVYEVFINNQLKGKGEYKAKKEIALNRAAQDACDKILNNMNAKNNISES	307

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pdy4g00319	307	FunFam	Endoribonuclease dicer-like 1	61	228	-	-
	Pdy4g00319	307	PANTHER	DICER-RELATED	54	300	-	GO:0003723(PANTHER)\|GO:0004525(PANTHER)\|GO:0005634(PANTHER)\|GO:0005737(PANTHER)\|GO:0030422(PANTHER)
	Pdy4g00319	307	SUPERFAMILY	dsRNA-binding domain-like	189	294	-	-
	Pdy4g00319	307	CDD	RIBOc	83	230	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Pdy4g00319	307	ProSiteProfiles	Ribonuclease III family domain profile.	67	207	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Pdy4g00319	307	ProSitePatterns	Ribonuclease III family signature.	100	108	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Pdy4g00319	307	Pfam	Ribonuclease III domain	100	206	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Pdy4g00319	307	SMART	riboneu5	82	230	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Pdy4g00319	307	SUPERFAMILY	RNase III domain-like	66	227	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Pdy4g00319	307	Gene3D	Ribonuclease III domain	55	229	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Pdy4g00319	307	Gene3D	-	230	306	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pdy4g00319	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pdy	Pdy-Chr4:6420414	Pdy7g02636	Pdy-Chr7:72872211	dispersed
	Pdy	Pdy-Chr4:6414244	Pdy4g00319	Pdy-Chr4:6420414	tandem