AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00335 ATGAGTAGATGCGACACTACTCGACACTTTTATCCTTTAACCAGTTTCCAAATTGGGGATTTGCAGTCATATCTTTCGGATCTTAGTCTTTTCTTGGCCCCTGATAGCAAGGGGTTCTATGTATTGGTGGATAATAGGCCATGGCTGGAAAATTTGCCATCACGGCCTGCACATCTATGGCAGTTGATGGTCACCAAGTCAAGAATGTCGCCTTTTGCAAACACAAGAGGGCAGAAGGGAAAGAAAGAGACCACCAAGTTTATTGATGAGAAGGTCAGACCTAAAGCTTCAAGCCAGTCCCCAAACTTGAAGAAATGGTTTTCAGTTGTTGATGCTGCAACACTGTCAAGAAAGAGAGCATTGCTACCTGTAAAGAAACTCAGGAGTTCTTTGCTTGCAAATAGCAAATTGCACAGAACCTTGTTTGGGTTTATTGTGTTTCAAGTGGTGTGGAAAGATGTACGTGGGCTCAACTACTTGAATGAGCTTCAGACTGATACATCTCTTGCTATAGAGGCTAAATACATGAAGAGATGGGAATTTGATAGCATATCTCAAGCATCTAAATGCGTAACTAGATGGTTTCCAGGGACACCACATGAATGCGATCTTTTGAAAGAGCGTCTCACCTCCATGATAGGAGATGTGTTTTATGATGCTCTTAAAGAATTTCCACAAGATAATGATGAAAATATCTCAAATGGGGAAATTGGATCTCCCTGCACTCCTGTTCGCAATCTTGCTGAAAAGCTAGAAACTTTAGTAGACCAAACAAGTATACTACATACACCCCCTCCTGATGGATCCTATAAAAGAAGAAAACTAATGAGTCCTGCAGGCATTAATATAGAGACCAGTTTTTATACTGAAGTAATTGATGGTGAAAAAGTTTGCACACAAATGGCCTCATCTTACACAAGTGATTGTGATGACACGACTGAAGCTAACGAGTACAGGGATGTGATACTTTTGTTTCGGTTTAATGACCATGACCTCCCTTTTGAATTAAAAAAAATAATAGTACCCGATTTGCGATTACTTAAGCTATTAGAAGCTGGACTTCCATCATGGGTGATCTTCTGTCAATCTTATCCTGTTTTTTGCCATATTTACCGCCCTTGGATGTGCCCTTTAGCAAGAGCTCTATATGTGTTAATCTCTATCGTTACCGTTGTCATTGGTTTCTATGATTTGTACAAAAATGTCCCCGTGCTTAAAGCAACAGCTTCCCGTTTATGTGGGCCACTTTTTGATTGGATAGAAACATGGGAGATGGTATCAAGGATCAAGTACCTGGGTACTATGTTGTTTTTGCACAACTCGGAGAAGGCTGTTATGTGGTTCTTGATGATGTCACGTACTGTGAGATCATTCGTTTCAGTTGTCACACAGCCTTTAGCTGGCCCGTTTCTTGATTTCATAGACGTTCTCCTTCCCTTTTGGAACTTATTTGTCCAAACGGGTCAGTATTTATGCTCGTTCATTTGGATTCTGATGGAAGCTTCTTGGGATGTGATGGATAATCTAATTGAAGCCATACTGCTTCCCGTGTGGTTCATCTTGTCAATTATTTGGATCATTGTTACGACTGTCATGTACCCTATACTTTGGTGCATTTGGGGAGTACTTTATGCTCCGATTAGTCTTATTCTTGGTGTCTCCAATTTTGTGGGATATGTTTATAACCAAACATATGATTTAGCTGGAGATGTTTGGCTGTTTGTGAGCGGGATTTTTAAGTTAGCTTCAAGTGCAGAGGCAACAGTCAACACTTATGAGGTTTCCATCTGGCGGTCGCTTTGGAATGACCTCTTTTCCCAGGTTTTCCGTGCTGTTCGGAGTATTTTAAACGGATTTGTAGCATTCTTTACAGCTTGCAATAGACATCGCTTAAGCATATATAATCATTTACAAGAGTTCATTCGAACGTTTAATCAACCAGCCCAGAGGCCACAACCGTTGAATTCTGCCCATGGATCACCAGGATCTAGAAGTCATTTACTGGCAGAGGCTAGAGAACGGAAGGTGTCACCGCGGAGAAACTTGAAACAGAGTTAA 2058 41.01 MSRCDTTRHFYPLTSFQIGDLQSYLSDLSLFLAPDSKGFYVLVDNRPWLENLPSRPAHLWQLMVTKSRMSPFANTRGQKGKKETTKFIDEKVRPKASSQSPNLKKWFSVVDAATLSRKRALLPVKKLRSSLLANSKLHRTLFGFIVFQVVWKDVRGLNYLNELQTDTSLAIEAKYMKRWEFDSISQASKCVTRWFPGTPHECDLLKERLTSMIGDVFYDALKEFPQDNDENISNGEIGSPCTPVRNLAEKLETLVDQTSILHTPPPDGSYKRRKLMSPAGINIETSFYTEVIDGEKVCTQMASSYTSDCDDTTEANEYRDVILLFRFNDHDLPFELKKIIVPDLRLLKLLEAGLPSWVIFCQSYPVFCHIYRPWMCPLARALYVLISIVTVVIGFYDLYKNVPVLKATASRLCGPLFDWIETWEMVSRIKYLGTMLFLHNSEKAVMWFLMMSRTVRSFVSVVTQPLAGPFLDFIDVLLPFWNLFVQTGQYLCSFIWILMEASWDVMDNLIEAILLPVWFILSIIWIIVTTVMYPILWCIWGVLYAPISLILGVSNFVGYVYNQTYDLAGDVWLFVSGIFKLASSAEATVNTYEVSIWRSLWNDLFSQVFRAVRSILNGFVAFFTACNRHRLSIYNHLQEFIRTFNQPAQRPQPLNSAHGSPGSRSHLLAEARERKVSPRRNLKQS 685
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00335 685 MobiDBLite consensus disorder prediction 648 685 - -
Pdy4g00335 685 PANTHER OS05G0597400 PROTEIN 1 662 - -
Pdy4g00335 685 MobiDBLite consensus disorder prediction 667 685 - -
Pdy4g00335 685 MobiDBLite consensus disorder prediction 648 662 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00335 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr4:6652416 Pdy9g01754 Pdy-Chr9:40575498 dispersed
Pdy Pdy-Chr4:6652416 Pdy7g02623 Pdy-Chr7:72687833 transposed