AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00339 ATGAGGAAGTTCTACAACCACAATAAAGGCAAAATCCACCCATCACCGCCGCCCGCCACCGCCACCGCCACCGCCAACCCCACCGACACACATCACTTATCTCTGCTACCCTTCGCAATAGCCTCACTTGCCGCCGCCCTTTCACCGGAGGACAAGGAAGTTTTGGCATACCTTCTTTCATGCTCTGTAACCACGACCGACATCAATAGAAACTTCTCCGGCAACACCAAAACCAGCTCCAGAGACTGTGTCGGAGGAGGAAGTCATCCTCCGAGATTCGATTGCGACTGTTTTTCATGTTACACCAGTTACTGGGTTCGCTGGGATGCCTCGCCAAATCGACAACTGATTCATGAAATCATCGATGCGTATGAAGACGGGTTGGTTCGTAACAAAAAGGGCGGGAAGAACAAGAAAGAAAGAAGAAAGAACAAGGTTTCTCCGTGTCCGAGTTCGTCACACGCGCCGGAGAAAGTCTCACACGCGCCGCCGCAAGTGGAAGAGAGCATGACTGAGAATTCTGGTAATGAGGGCGATCAAGATGAATCGGTCATCGAGTCATCGTTGGAGAAAGGATCAGTAAGAAAATTTGTAAATTTCATAGGAGAAAGGATTTGGGGTGTTTGGGGGGTTTAA 636 49.84 MRKFYNHNKGKIHPSPPPATATATANPTDTHHLSLLPFAIASLAAALSPEDKEVLAYLLSCSVTTTDINRNFSGNTKTSSRDCVGGGSHPPRFDCDCFSCYTSYWVRWDASPNRQLIHEIIDAYEDGLVRNKKGGKNKKERRKNKVSPCPSSSHAPEKVSHAPPQVEESMTENSGNEGDQDESVIESSLEKGSVRKFVNFIGERIWGVWGV 211
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00339 211 MobiDBLite consensus disorder prediction 1 26 - -
Pdy4g00339 211 PANTHER F12F1.11-RELATED 1 210 - -
Pdy4g00339 211 MobiDBLite consensus disorder prediction 166 182 - -
Pdy4g00339 211 MobiDBLite consensus disorder prediction 131 186 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00339 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
132632 Pdy4g00339 Pdy7g02607
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr1:114292965 Pdy4g00339 Pdy-Chr4:6724483 dispersed
Pdy Pdy-Chr4:6724483 Pdy4g00341 Pdy-Chr4:6753099 dispersed
Pdy Pdy-Chr4:6724483 Pdy4g00340 Pdy-Chr4:6750521 tandem
Pdy Pdy-Chr4:6724483 Pdy7g02607 Pdy-Chr7:72547826 wgd