Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy4g00347 | ATGCGGTTATCCATGACAATCACAAACCCTAGCTTCCCATCTGTTCCCCCATTTCACCAATCCACCCCTCACCCTCCTTCATACAAACAACCCCCAATGATAACACTTCAGAAACCATCAAAAACCCATGATACTTCTACAAATTCCCTAAAGAATTCTGGGTTTTTATCAGCAATTGGGAACGCAATCGAAGAACAGGAGTATAGGAAAGCCAGGGCTGAAGTTATTCGAAAAGGGACAGGGTTAGAGGGTTATAATATCGAGGGTCTTTCAATTGGTGGTCACGAAACTTGTGTTATTATCCCTGAATTCAAGTGTGCGTTTGATATCGGAAGGTGTCCTCCCAGAGCTGTTGCCATGAACTATTTGTTCATTACTCATGCTCACCTTGATCACATTGGCGGGCTACCCATGTATATCGCAACTCGTGGTTTGTATAGCATGAGTCCCCCAACTGTATTTGTACCTCCTTCCATTAAAGAGGATGTTGAAAACTTAATCGAGCTTCACAGGAAGATGGGTCAGGTGGAGCTAAATCTTGATTTGGTTGCATTGGATGTAGGAGAGACATATGAGCTAAGAAACGATCTTGTTGTACGGCCTTTTAAAACTCATCATGTCATACCCAGTCAGGGTTATGTCATTTACTCGGTTCGCAAGAAGCTAAAAAAGCAATACGCTCATTTGAAAGGAAGAGAAATCGAGAAAAAGAAGAAATCTGGTGTTGAGATTACAGATATCATATTGTCCCCAGAGGTGGCATTCACTGGTGATACAAGTTCTGATTTTATACTTGATCCCAGAAGTTCTGATGCCTTAAGAGCCAAAGTTCTTATTACTGAGGCTACTTTCTTGGATGACAAATGTAATATTGAGCATGCGCGAGAACATGGTCACATGCATATTGATGAGATTATCGAGCATGCTAAGTGGATTAGAAACGACTCGATTCTATTGACTCATTTCTCTTCACGCTACCATATCGAGGAAATCCGTGAAGCTGTGACAAAGTTGCAGTCAAAGGTTTCAGCGAAAGTGGTTCCACTCACAGAAGGTTTTAGATCAATGTACTCATCATAA | 1080 | 41.57 | MRLSMTITNPSFPSVPPFHQSTPHPPSYKQPPMITLQKPSKTHDTSTNSLKNSGFLSAIGNAIEEQEYRKARAEVIRKGTGLEGYNIEGLSIGGHETCVIIPEFKCAFDIGRCPPRAVAMNYLFITHAHLDHIGGLPMYIATRGLYSMSPPTVFVPPSIKEDVENLIELHRKMGQVELNLDLVALDVGETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLKKQYAHLKGREIEKKKKSGVEITDIILSPEVAFTGDTSSDFILDPRSSDALRAKVLITEATFLDDKCNIEHAREHGHMHIDEIIEHAKWIRNDSILLTHFSSRYHIEEIREAVTKLQSKVSAKVVPLTEGFRSMYSS | 359 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy4g00347 | 359 | CDD | RNaseZ-MBL-fold | 84 | 282 | - | - | |
| Pdy4g00347 | 359 | PANTHER | TRNASE Z TRZ1 | 41 | 353 | - | - | |
| Pdy4g00347 | 359 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
| Pdy4g00347 | 359 | SUPERFAMILY | Metallo-hydrolase-oxidoreductase | 119 | 339 | IPR036866 | - | |
| Pdy4g00347 | 359 | Gene3D | - | 85 | 354 | IPR036866 | - | |
| Pdy4g00347 | 359 | MobiDBLite | consensus disorder prediction | 16 | 30 | - | - | |
| Pdy4g00347 | 359 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Pdy4g00347 | 359 | Pfam | Beta-lactamase superfamily domain | 119 | 322 | IPR001279 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy4g00347 | K00784 | ribonuclease Z [EC:3.1.26.11] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pdy | Pdy-Chr4:6817901 | Pdy6g00277 | Pdy-Chr6:4355437 | dispersed |