Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy4g00380 | ATGTTTCATCCAACCCCGCTCCCCCAAATTCAAAAAATGTCGCTCACACCAACTGTTCATCACAGTGATCGCGATCTTATCGCACACCCTGTTCGTCCTTCCGGTGAAATTCATGTTATTGTGGGGCCGATGTTCGCCGGTAAAACTACAGCTCTTCTTCGCAGGATCAAATCTGAATGTTCCAGTGGCAGGAATATAGCGATGATCAAATCAAGCAAGGATACCCGATACGCGATAGATTCAGTTGTGACCCATGATGGAAACAAGTATCCATGTTGGGCTCTGCCTGATCTGTCTTCATTTAAACAAAGACTTGGAGAAGAAGCTTATGAAAAGTTGGATGTTATAGGAATTGATGAAGCACAATTCTTTGATGATCTCTATGACTTTTGTTGTAAAGCTGCTGATCATGATGGGAAAACTGTTATAGTTGCTGGTCTTGATGGTGATTATTTAAGAAGGAACTTTGGTCCAGTGCTTGATATAGTACCCCTTGCTGATACCATAACCAAATTAACCGCTCGATGTGAACTATGTGGCAAACGAGCTCATTTCACCTACAGAAAGACCAGAGAGACAAAAACCGAACTTATAGGTGGGGCGGATATGTATATGCCTGTTTGTCGTCAACATTATGTTAGCGGTCATACGGTGACCAAAGCTGCTGTTTAG | 672 | 42.71 | MFHPTPLPQIQKMSLTPTVHHSDRDLIAHPVRPSGEIHVIVGPMFAGKTTALLRRIKSECSSGRNIAMIKSSKDTRYAIDSVVTHDGNKYPCWALPDLSSFKQRLGEEAYEKLDVIGIDEAQFFDDLYDFCCKAADHDGKTVIVAGLDGDYLRRNFGPVLDIVPLADTITKLTARCELCGKRAHFTYRKTRETKTELIGGADMYMPVCRQHYVSGHTVTKAAV | 223 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy4g00380 | 223 | PANTHER | THYMIDINE KINASE | 29 | 222 | IPR001267 | GO:0004797(PANTHER)|GO:0004797(InterPro)|GO:0005524(InterPro)|GO:0046104(PANTHER) | |
| Pdy4g00380 | 223 | FunFam | Thymidine kinase | 173 | 215 | - | - | |
| Pdy4g00380 | 223 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 173 | 214 | - | - | |
| Pdy4g00380 | 223 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 35 | 173 | IPR027417 | - | |
| Pdy4g00380 | 223 | Gene3D | - | 173 | 214 | - | - | |
| Pdy4g00380 | 223 | PIRSF | Tdk | 32 | 222 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Pdy4g00380 | 223 | FunFam | Thymidine kinase | 31 | 172 | - | - | |
| Pdy4g00380 | 223 | ProSitePatterns | Thymidine kinase cellular-type signature. | 199 | 212 | IPR020633 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Pdy4g00380 | 223 | Gene3D | - | 29 | 172 | IPR027417 | - | |
| Pdy4g00380 | 223 | Pfam | Thymidine kinase | 35 | 212 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy4g00380 | K00857 | thymidine kinase [EC:2.7.1.21] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pdy | Pdy-Chr1:66954641 | Pdy4g00380 | Pdy-Chr4:7347151 | dispersed |