Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pdy4g00387	ATGAATACAACACTTCTCAAAGCATCGCCTCTATTCAGTTATCGTTGCCCTTTACCCCCTTCAAGAATTTCGAAACCTTTTGCTCCCTTTCGGTACCATACCAATACTAAATTGTCGAAACAAAAGTTTCAGATTTCAAGAACCTCCAATGCGTTTAACACCAGAGTTTACCCCAGGAATTCCGTAAGTTTTGAAACTAAAGATGAAGAATCTACCAAAGATTCGCCAAGAACAGAGGATTTCAACAGGATTGGGGGTTTAATTAGATGCGGAATTGTGGTGGGTATGTTGGTCTTTGGGGTAATTAGATGTCAAAGAGCTCTAGCGATGGAGACTAGTAGCGATTTAGGGGTTTTTGCACAAAAGAGTATGGTTTATATGAAGGGTTTTTGCAATGGGCCCAAACTTTCACAGATTCTACGAGTTTGCAGAGAACAAGGTTTGATTTTAGCTGCACTTTTAGGGTTATCAGCCTTCTTTTCCATGGCTGAGACTTCAATTACCACTCTGTCACCATGGAAGGTGAGAGAGCTTGCTGAAAAAGAAGGAGAAAATGGCGTATTTAAGCTGCTCCGTACGGACATTACTCGCTTCCTTACCACCATTCTCATTGGCACCACTGTGGTCAACATTGGAGCTACTGCACTTTTCACAGAGGCAGCAACAACAGTTTTTGGTGAAGCTGGTGTTAGTGCAGCAACGGGCGTTATGACGGTTGTTGTTTTACTTCTCACTGAAATTACTCCTAAAAGTATAGCTGTTCACAATGCGACTGCTGTTGCTAGGGCTGTGGTACGTCCAGTTGCATGGCTTTCTTTGGTTCTATATCCTGTTGGAAGAGTTGTAACTTTTCTTTCGATGGGAATGCTTAAAATTCTTGGCTTGAAAGGGAAAAGTGAACCATCTGTCACTGAAGATGAACTCAAGTTAATGTTGAGGGTTGCTGAGCTGAGTGGGGCCATTGAGGAGGAAGAGCAGGATATGATCGAGAATGTGTTGGAGATAAAAGACACTCATGTGAAGGAAGTTATGACCCCTCTTGTAGATGTAGTTGCAGTCGATTCTCGTGCAACATTAGTTGATTTTCATCATTTATGGGTGACTCATCAATATTCCAGGGTGCCAGTATTTGAGCAGCGAATTGATAACATCGTGGGTGTAGCTTACGCAATGGATTTGTTAGAACTTGTTCAAAAAGGAGATATGCTAGAAACTGCAGTGGTGGGAGAGATTGCTCACAAGCCTGCATATTTCGTTCCTGATTCAATGTTAGTTTGGAATCTATTGAGGGAGTTCCGGATCAGAAAGGTCCACATGGCTGTGGTCCTCAATGAATATGGAGGAACTGTGGGAATTGTAACCCTTGAAGATGTTGTTGAGGAAATTGTTGGTGAAATCTTTGATGAGAATGACTCGAAGGAGGAAATTGAGAGAAAAACCGGGAATATTGTTAAGCGGGCAGAGGGAGTCTTTGATGTTGATGCAAATACATCAATTTACCAACTCTGTGAAGATCTGGATATCATTTTGCCTGATGATCACCAATACGAGACCGTTTCTGGCTTCATTTGTGAAGCATTTGGATATATACCAAGAACAGGTGAAAGTATAAAAGTAGTTCTAAAGAAAGCAAATGAAGAAGAAGATGACAATAATGATGAGAGCAAACAAGAAACAAATGGTCAAGATCAGAAAGATAATAAATCTCAAACATTCAAGCTCGGGATATTAGCAGGAAATTGTAGAAAGGTAAATACCGTGAGATTCGAAAGAATAAACAATCATTCAGCAAAAGAAATCAAAGAAGTTGCTCGCCTCATGCCCAGATTTTGGAAAAAGAAATTGAAAAATGATGAAAACTCAGGCAGTGGCGATGATGAACCCAAGACCTCTTTTTCCCATCATCGTATCATGGCAGAAGATAACAAACATTAA	1935	40.67	MNTTLLKASPLFSYRCPLPPSRISKPFAPFRYHTNTKLSKQKFQISRTSNAFNTRVYPRNSVSFETKDEESTKDSPRTEDFNRIGGLIRCGIVVGMLVFGVIRCQRALAMETSSDLGVFAQKSMVYMKGFCNGPKLSQILRVCREQGLILAALLGLSAFFSMAETSITTLSPWKVRELAEKEGENGVFKLLRTDITRFLTTILIGTTVVNIGATALFTEAATTVFGEAGVSAATGVMTVVVLLLTEITPKSIAVHNATAVARAVVRPVAWLSLVLYPVGRVVTFLSMGMLKILGLKGKSEPSVTEDELKLMLRVAELSGAIEEEEQDMIENVLEIKDTHVKEVMTPLVDVVAVDSRATLVDFHHLWVTHQYSRVPVFEQRIDNIVGVAYAMDLLELVQKGDMLETAVVGEIAHKPAYFVPDSMLVWNLLREFRIRKVHMAVVLNEYGGTVGIVTLEDVVEEIVGEIFDENDSKEEIERKTGNIVKRAEGVFDVDANTSIYQLCEDLDIILPDDHQYETVSGFICEAFGYIPRTGESIKVVLKKANEEEDDNNDESKQETNGQDQKDNKSQTFKLGILAGNCRKVNTVRFERINNHSAKEIKEVARLMPRFWKKKLKNDENSGSGDDEPKTSFSHHRIMAEDNKH	644

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pdy4g00387	644	Pfam	Transporter associated domain	485	543	IPR005170	-
	Pdy4g00387	644	ProSiteProfiles	CNNM transmembrane domain profile.	139	325	IPR002550	-
	Pdy4g00387	644	Pfam	Cyclin M transmembrane N-terminal domain	148	325	IPR002550	-
	Pdy4g00387	644	Gene3D	-	319	474	IPR046342	-
	Pdy4g00387	644	MobiDBLite	consensus disorder prediction	545	563	-	-
	Pdy4g00387	644	FunFam	Magnesium-cobalt efflux protein CorC	321	471	-	-
	Pdy4g00387	644	SUPERFAMILY	FAD-binding-transporter-associated domain-like	482	545	IPR036318	GO:0050660(InterPro)
	Pdy4g00387	644	ProSiteProfiles	CBS domain profile.	344	405	IPR000644	-
	Pdy4g00387	644	SUPERFAMILY	CBS-domain pair	327	466	IPR046342	-
	Pdy4g00387	644	CDD	CBS-pair-CorC-HlyC-assoc	339	460	IPR044751	-
	Pdy4g00387	644	SMART	CorC-HlyC-2	484	593	IPR005170	-
	Pdy4g00387	644	ProSiteProfiles	CBS domain profile.	412	469	IPR000644	-
	Pdy4g00387	644	Gene3D	-	479	575	IPR016169	-
	Pdy4g00387	644	PANTHER	HEMOLYSIN-RELATED	121	616	-	-
	Pdy4g00387	644	MobiDBLite	consensus disorder prediction	545	569	-	-
	Pdy4g00387	644	MobiDBLite	consensus disorder prediction	614	644	-	-
	Pdy4g00387	644	Coils	Coil	538	558	-	-
	Pdy4g00387	644	Pfam	CBS domain	408	463	IPR000644	-
	Pdy4g00387	644	Pfam	CBS domain	340	397	IPR000644	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pdy4g00387	K03699	magnesium and cobalt exporter, CNNM family

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pdy	Pdy-Chr4:7415460	Pdy4g01083	Pdy-Chr4:20653219	dispersed
	Pdy	Pdy-Chr7:63047271	Pdy4g00387	Pdy-Chr4:7415460	dispersed