Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pdy4g00423	ATGAAGCCATTATCGGCGTTTGTCTTTCTCTCATTCCTCTTAATAATCTCTCTATCCACCACCACCACCACCAATGCTCATAACATCACCCGTATCCTTGCCAAAAACCCAGAATTCTCAACCTTCAACCACTACCTCACCCTCACCCACCTCGCCGGAGAAATTAACCGTCGCCAGACTATCACCGTCTGCGCCGTCGACAATGCCGCCATGTCTGCCTTGATCGCCAAAGGCCTCTCGCTAGTAACACTAAAAAACGTTCTCTCTCTTCACGTCTTCGCCGACTATTTCGGCTCCAAAAAGCTCCACCAGATCACCAAAGGCTCCACCTCCACCGCCACTATGTACCAGGCCACCGGCGAAGCCCCTGGCACCACCGGCTACGTCCACATCACCGACGTAAAAGGCGGAAAAGTCCAATTCACTCCCGAAGACAACCCCTCCCAAACCGACGTCGTTTACGTCAAATCAGTTTTGGAAATGCCATACAACATCTCTGTGATTCAAATCAGCGACGTTTTAAATTCGCCGGAGGCTGAGGCTCCGACATCGGCGCCTGATCTGAACTTGACCACGTTATTACAACGAGAAGGATGTAAAGAATTTTACAACCTGTTATCTACTTCTGGAGCAATCGGGACGTTTTTAAGCACCTTTGACGGCGGAGTAACGGTGTTTTGTCCAAGTGACGACGCTGTTACTGCCTTTGCCCCAAAGTACAAAAACTTAACGGCGGAGGGGAAAACGACGTTGTTGCTTTACCACGGCGTTCCGACTTATAACTCGATGGGGATGTTGAGATCGAGCAATGGACTGATGAATACCTTAGCGACGGAAGGGGCGAATAAGTACGATTTCACGGTGCAAAACGACGGCGAGGATGTGAAGTTGAAGACGAAAGTGGTGACGGCGGCGATCACGGGGACAGTGGTGGACGACGAACCTGTGGCGATTTATAGGATCGATAAGGTTTTGTTACCTCGTGAGTTGTTTAAGGGGGCGGTGGTGGCGGATGAGCCTGCACCGGCGCCGAAGGCGGGAAAGAAGAAGAAGGCTGCGAAGAAGAGTGGTGATGCCGGAGCTCCGGGACCGGATTCTTCAGACGATTATGATGACGGTGATACGGCGGATCAGAAGGCTAATTCCGGTGGCAGGTTGGTGGCCTCAGCGATTATGGCGGTGCTTCTACCCGTCCTGTTCATTTGA	1206	51.66	MKPLSAFVFLSFLLIISLSTTTTTNAHNITRILAKNPEFSTFNHYLTLTHLAGEINRRQTITVCAVDNAAMSALIAKGLSLVTLKNVLSLHVFADYFGSKKLHQITKGSTSTATMYQATGEAPGTTGYVHITDVKGGKVQFTPEDNPSQTDVVYVKSVLEMPYNISVIQISDVLNSPEAEAPTSAPDLNLTTLLQREGCKEFYNLLSTSGAIGTFLSTFDGGVTVFCPSDDAVTAFAPKYKNLTAEGKTTLLLYHGVPTYNSMGMLRSSNGLMNTLATEGANKYDFTVQNDGEDVKLKTKVVTAAITGTVVDDEPVAIYRIDKVLLPRELFKGAVVADEPAPAPKAGKKKKAAKKSGDAGAPGPDSSDDYDDGDTADQKANSGGRLVASAIMAVLLPVLFI	401

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pdy4g00423	401	Pfam	Fasciclin domain	37	131	IPR000782	-
	Pdy4g00423	401	Pfam	Fasciclin domain	198	327	IPR000782	-
	Pdy4g00423	401	PANTHER	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	5	393	IPR033254	GO:0046658(PANTHER)
	Pdy4g00423	401	ProSiteProfiles	FAS1-BIgH3 domain profile.	186	325	IPR000782	-
	Pdy4g00423	401	SMART	fasc-3	224	328	IPR000782	-
	Pdy4g00423	401	SMART	fasc-3	62	178	IPR000782	-
	Pdy4g00423	401	Gene3D	FAS1 domain	25	170	IPR036378	-
	Pdy4g00423	401	SUPERFAMILY	FAS1 domain	193	327	IPR036378	-
	Pdy4g00423	401	Gene3D	FAS1 domain	171	328	IPR036378	-
	Pdy4g00423	401	SUPERFAMILY	FAS1 domain	32	177	IPR036378	-
	Pdy4g00423	401	FunFam	Fasciclin-like arabinogalactan protein 10	178	328	-	-
	Pdy4g00423	401	MobiDBLite	consensus disorder prediction	341	381	-	-
	Pdy4g00423	401	FunFam	Fasciclin-like arabinogalactan protein 2	25	167	-	-
	Pdy4g00423	401	ProSiteProfiles	FAS1-BIgH3 domain profile.	26	174	IPR000782	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pdy4g00423	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	132645	Pdy4g00423	Pdy9g01807

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pdy	Pdy-Chr4:8031387	Pdy4g02881	Pdy-Chr4:76235572	dispersed
	Pdy	Pdy-Chr3:6812860	Pdy4g00423	Pdy-Chr4:8031387	wgd
	Pdy	Pdy-Chr4:8031387	Pdy9g01807	Pdy-Chr9:41349625	wgd