Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pdy4g00431	ATGGCGGAAGCTTACAGAATCTTCCAGACTACACTCATGCCTTCGTTATCCCAAAGCTTAGCTCTCAGAAAACCTACCTCTCGAACTTTATCCTTACGTAGAACCTCACCAGCGATCATCCGCTGCACGATCTCTACCAGCAGTAGCGATACGGCTAAGAATGCCGTGGCTCCTAAGCCGATACCGTGGGGTTGCGAGATAGATTCTCTGGAGAACGCGGCTGCGTTGGAGAAATGGTTAACTGATTCCGGTTTGCCGCCGCAGAAAATGGATATCCAGAAGGTTGATGTTGGAGAGAGAGGTCTCGTTGCCACTAATAACATTAGAAAGGGCGAGAAAATACTTTTTGTACCTCCGTCTCTCGTTATCTCCGCCGATTCGGAGTGGAGTTTTCCGGAAGCTGGGGAGGTTTTAAAGAGATATGATGTGCCCGACTGGCCGTTGATTGCAACCTACCTAATTAGTGAGGCTAGTCTTATGAAGTCATCTAGATGGAGCAACTATATATCAGCCTTGCCAAGACAGCCTTATTCACTTTTATACTGGACACGTGCAGAGTTAGATAGGTACTTAGAAGCATCACAGATTAGAGAACGGGCAATTGAAAGGATCAATAATGTAACCGGAACATATAATGACTTGAGGGAAAGAATTTTCAACAAGCATCCTAATTTATTTCCTGAAGAGGTATTCAATATGGAGACATTTAGATGGTCCTTCGGCATTCTTTTTTCACGTTTGGTTCGATTACCCTCACTGGATGGAAGGGTTGCTTTGGTCCCTTGGGCAGATATGCTGAATCATAGTTGTGATGTGGAAACCTTTTTGGATTATGATAAATCAACGAAGGGAGTCGTATTTACAACAGATCGCCCTTACCAGCCAGGTGAGCAGGTGTTCATTTCATATGGCAGGAAATCTAATGGAGAACTCTTGCTCTCTTACGGGTTTGTGCCAAGACAAGGGACAAACCCACGTGACTCAGTTGAGCTGCCATTGTCACTTAAAAAATCAGACAAGTGTTATGAACAAAAGGTTGAAGCTCTGAAGAAGCATGGTTTGTCAGCATCAGAATGTTATCCTTTACAAGTCACTGGTTGGCCATCGGAGCTGATAGCATACGCGTATTTAGCTGTCAGTCCCTCTAGTCTGAGTGGAAAGTTTGACGAGATGGCTTCTGCAGCATCAAATAAAAGCACAAGCAAAAAGGAAATCAGATATCCTGAATTAGAGGAAAAAGCATTCCAGTTTATCTTGGATAGCTGTGAATCCAGCATATCAAAGTACACCAAGTTCCTTCAGGCAAGTGGATCAATGGATTTGGATATAACATCTCCGAAGCAGCTCAACCGCAGAGTGTTCCTTAAACAGCTAGCTGTGGACTTGTGCAATAGTGAACAGAGAATCCTTTTCCGTGCACAATATATATTGAGGAGAAAATTAAGGGATATGAGGAGAGGTGAACTGAAGGCCCTAAAACTATTTGATAGTGTCACAAAGTTCTTCAAATAA	1512	43.45	MAEAYRIFQTTLMPSLSQSLALRKPTSRTLSLRRTSPAIIRCTISTSSSDTAKNAVAPKPIPWGCEIDSLENAAALEKWLTDSGLPPQKMDIQKVDVGERGLVATNNIRKGEKILFVPPSLVISADSEWSFPEAGEVLKRYDVPDWPLIATYLISEASLMKSSRWSNYISALPRQPYSLLYWTRAELDRYLEASQIRERAIERINNVTGTYNDLRERIFNKHPNLFPEEVFNMETFRWSFGILFSRLVRLPSLDGRVALVPWADMLNHSCDVETFLDYDKSTKGVVFTTDRPYQPGEQVFISYGRKSNGELLLSYGFVPRQGTNPRDSVELPLSLKKSDKCYEQKVEALKKHGLSASECYPLQVTGWPSELIAYAYLAVSPSSLSGKFDEMASAASNKSTSKKEIRYPELEEKAFQFILDSCESSISKYTKFLQASGSMDLDITSPKQLNRRVFLKQLAVDLCNSEQRILFRAQYILRRKLRDMRRGELKALKLFDSVTKFFK	503

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pdy4g00431	503	FunFam	Ribulose-1,5 bisphosphate carboxylase-oxygenase large subunit N-methyltransferase, chloroplastic	56	317	-	-
	Pdy4g00431	503	ProSiteProfiles	SET domain profile.	88	304	IPR001214	GO:0005515(InterPro)
	Pdy4g00431	503	CDD	SET-RBCMT	87	318	IPR044431	GO:0016279(InterPro)\|GO:0018022(InterPro)
	Pdy4g00431	503	SUPERFAMILY	RuBisCo LSMT C-terminal, substrate-binding domain	334	502	IPR036464	-
	Pdy4g00431	503	SMART	set-7	88	310	IPR001214	GO:0005515(InterPro)
	Pdy4g00431	503	Pfam	Rubisco LSMT substrate-binding	337	470	IPR015353	-
	Pdy4g00431	503	Coils	Coil	197	217	-	-
	Pdy4g00431	503	Gene3D	set domain protein methyltransferase, domain 1	70	318	-	-
	Pdy4g00431	503	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	74	478	IPR050600	GO:0016279(PANTHER)\|GO:0018026(PANTHER)
	Pdy4g00431	503	Pfam	SET domain	100	304	IPR001214	GO:0005515(InterPro)
	Pdy4g00431	503	FunFam	Rubisco methyltransferase family protein	323	486	-	-
	Pdy4g00431	503	SUPERFAMILY	SET domain	72	320	IPR046341	-
	Pdy4g00431	503	Gene3D	-	322	492	IPR036464	-
	Pdy4g00431	503	PIRSF	RMT-SET	1	500	IPR011192	GO:0009507(InterPro)\|GO:0030785(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pdy4g00431	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pdy	Pdy-Chr4:8086835	Pdy8g01779	Pdy-Chr8:51608455	dispersed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Pdy	SET	2.5e-17	No_clan		TR	SET