AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00441 ATGCATAAAACGGCGCAATCGTGGTTCACCGGAGGTCCGAGCCAGTCGAGCAGCGATCTGACAAAACAACCTCCTTCTCTTCTTGCTGATTGGAACGCCTACGCCGCGTCTTCACAAGCTAATCAAGATCTAGACTCTTCTGGCCTCGGTTTCGATCTCGAAGCCGCAGTTAGAACCGCCAACGATAAGGTTTCCGGAACCTTTAATGTAGTTTCAAAGGGAGTGAGGGACATACCCGGGAACTTGCAGTCTGCCACGAGCAATGTCCCAACCGGAAAATCTCTTACAACTTTTGGTGTACTTCTTGCTGTTGGGGTGTTCCTTGTCTTCATCGCCGTCACTGTGTTTCTACCAGTCATGGTGCTTGTCCCTCAGAAATTTGCTATATGTTTCACCATTGGCTGTGCCCTCATAATTGCTTCATTTTTTGCCCTCAAAGGATACAGAACTCAGTTTGCACATATGACATCTAAAGAGAGACTCCCTATTACATTGGGCTTTATTGGCAGCATGCTGGGTACTGTTTATGTTTCAATGGTGCTTCACAGTTATGTTCTTTCAGTGTTCTTCTCTATTCTACAGGTTATCTCATTGTCATACTATGCAATATCCTACTTCCCTGGTGGATCGGCTGGCGTGAAATTCTTCACTTCTGCCATTACTTCATCTATTCTGAGATGCTTTGGGCGGTGA 693 46.03 MHKTAQSWFTGGPSQSSSDLTKQPPSLLADWNAYAASSQANQDLDSSGLGFDLEAAVRTANDKVSGTFNVVSKGVRDIPGNLQSATSNVPTGKSLTTFGVLLAVGVFLVFIAVTVFLPVMVLVPQKFAICFTIGCALIIASFFALKGYRTQFAHMTSKERLPITLGFIGSMLGTVYVSMVLHSYVLSVFFSILQVISLSYYAISYFPGGSAGVKFFTSAITSSILRCFGR 230
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00441 230 Pfam Got1-Sft2-like family 95 207 IPR007305 GO:0016192(InterPro)
Pdy4g00441 230 MobiDBLite consensus disorder prediction 1 23 - -
Pdy4g00441 230 PANTHER UNCHARACTERIZED 1 221 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00441 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr4:8225879 Pdy7g01803 Pdy-Chr7:61600772 dispersed