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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00455 ATGACGAAGCAAAAGATAGTGCTGAAGGTGACGATGAAGAACAACAAGAAGTTTCGTAAGGCTATGAAGATCGCTGCTACATTTTGCGGAGTAGAATCGGTGGCGTTTTTGGGAACAGATAAAGAAGAGATTGCGGTGACCGGAGAAGGAATTGATTCCGTTGAACTTACGCGCATGCTAAGAAAAAGTGTTGGTCACGCGGAGCTTGTGAGTGTAGGTCCGGTGAAAGAAGAGAAATCTGCCGCCGGGAAGGAGACCAAAGAAAAAGAGGCAAGATTTGAGTATGTTTATCATCCACCACCACCCTATTACGGTCAATTCATGTTCCCCTTTCAAGTTGTGCATGATGTCCCTTATAATTCTTGCAACATCTTGTAA 378 44.18 MTKQKIVLKVTMKNNKKFRKAMKIAATFCGVESVAFLGTDKEEIAVTGEGIDSVELTRMLRKSVGHAELVSVGPVKEEKSAAGKETKEKEARFEYVYHPPPPYYGQFMFPFQVVHDVPYNSCNIL 125
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00455 125 Gene3D - 1 78 - -
Pdy4g00455 125 PANTHER OS04G0464100 PROTEIN 4 104 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00455 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr4:8496955 Pdy4g00455 Pdy-Chr4:8535667 dispersed
Pdy Pdy-Chr4:8500742 Pdy4g00455 Pdy-Chr4:8535667 tandem
Pdy Pdy-Chr4:8535667 Pdy4g00456 Pdy-Chr4:8569885 tandem