Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pdy4g00510	ATGGCTTCCCATTCCTTAACTGCCGGCAATTTCAGACTCCGCTTTCAATTTCCCTCGATATCTCACTTGGATTCCGCTCTCAAATCACCTAATGGATCTCTAATTACTATACCCACCACCCGATTTCCTTCATCCATTCGCGCTATGGGTTCTTCATCTTCTTCATCGCAGAAACCAGACGCCACAACCCAAGAAGCAGGAAAAACGGATTTTAAATCGGTTAGTGATCAAGAATGGAAGAAGAAGCTTACTGGAGAACAATTTTATGTAACTCGCCAGAAGGGAACAGAAAGGGCCTTCACCGGGGAATACTGGGACACCAAAACCCCGGGGACTTACCAGTGCATTTGTTGCGACACTCCACTATTCGAGTCATCCACCAAGTTCGATAGTGGAACCGGTTGGCCTTCATACTATGAGCCGATAGGAACCAATGTGAAGTCAAAACTAGACCTATCCATCATTTTCATGCCTCGGCAAGAAGTTGTATGTGCAGCTTGTGATGCTCATCTTGGTCATGTATTTGATGACGGTCCTCCACCGACAGGAAAACGTTATTGCATTAACAGTGCTTCCCTGAAATTGAAGCCAAAGTAG	597	45.56	MASHSLTAGNFRLRFQFPSISHLDSALKSPNGSLITIPTTRFPSSIRAMGSSSSSSQKPDATTQEAGKTDFKSVSDQEWKKKLTGEQFYVTRQKGTERAFTGEYWDTKTPGTYQCICCDTPLFESSTKFDSGTGWPSYYEPIGTNVKSKLDLSIIFMPRQEVVCAACDAHLGHVFDDGPPPTGKRYCINSASLKLKPK	198

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pdy4g00510	198	ProSiteProfiles	Methionine-R-sulfoxide reductase (MsrB) domain profile.	76	198	IPR002579	GO:0033743(InterPro)
	Pdy4g00510	198	MobiDBLite	consensus disorder prediction	46	70	-	-
	Pdy4g00510	198	Gene3D	Peptide methionine sulfoxide reductase.	54	198	-	-
	Pdy4g00510	198	MobiDBLite	consensus disorder prediction	46	73	-	-
	Pdy4g00510	198	Pfam	SelR domain	78	197	IPR002579	GO:0033743(InterPro)
	Pdy4g00510	198	NCBIfam	peptide-methionine (R)-S-oxide reductase MsrB	74	197	IPR002579	GO:0033743(InterPro)
	Pdy4g00510	198	PANTHER	METHIONINE SULFOXIDE REDUCTASE	46	197	IPR028427	GO:0005737(PANTHER)\|GO:0006979(InterPro)\|GO:0016671(InterPro)\|GO:0030091(InterPro)\|GO:0033743(PANTHER)
	Pdy4g00510	198	SUPERFAMILY	Mss4-like	74	197	IPR011057	-
	Pdy4g00510	198	FunFam	Peptide methionine sulfoxide reductase MsrB	68	198	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pdy4g00510	K07305	peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Pdy	Pdy-Chr4:9589197	Pdy4g03392	Pdy-Chr4:82857527	dispersed