AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00540 ATGGAAGGTTTAAAGATAGATGATGAAGAAGCAATAAGAAAGGGTGCAGAAAAGTATAGATCGTTTCTTCATGAAGAAGCTCAGAACAATCACTGGAGACATGGTGGTCCTCCGATTTATGATGCCGTTAACCAGCTCTTTGAACAAGGCCGAACCAAGGTGTGGGAAAAGGGGTCATTAGAAGAAACCGTTCAAAACGCAATAAAGTCATGGGAGATGGAGCTCAGCCACAAGACTAGGGTACAAGACTTCAAGACCATTAATCCTCAGAAGTTCAGATTGATTGTCAATGGAAAAGAGGGGTTGAACGCAGAGGAAACACTAAAAGTAGGAAGTTACAACGCATTACTAAAGAATACGCTTCCAGAGCAGTACAAGTATTATAAAGCAGAGGAAGAGACCTTTGAATCGTCTCATGATATTTTTCGATCTGCATTTCCACGTGGATTTGCATGGGAGGTGATAAGCGTTCATTCGGGACCGCCTGTGATATCGTACAAATTTCGACATTGGGGTTACTTTGAAGGCCCGTACAAAGGCCATGCCCCCACTGGTGAAATGGTTGATTTTTATGGTATGGGGATCCTTAAGGTTGACGAATCATTAAAAGCGGAAGATGTTGAGGTCTATTACGATCCGGCTGATCTTATCTCAAAGTTGCTCAAGGGATCGTTGATCTCTGAAGAGCAAAATAATGCGGCAGATGATTCTGATCGAGGCAAACACTGGTAG 732 42.9 MEGLKIDDEEAIRKGAEKYRSFLHEEAQNNHWRHGGPPIYDAVNQLFEQGRTKVWEKGSLEETVQNAIKSWEMELSHKTRVQDFKTINPQKFRLIVNGKEGLNAEETLKVGSYNALLKNTLPEQYKYYKAEEETFESSHDIFRSAFPRGFAWEVISVHSGPPVISYKFRHWGYFEGPYKGHAPTGEMVDFYGMGILKVDESLKAEDVEVYYDPADLISKLLKGSLISEEQNNAADDSDRGKHW 243
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00540 243 Gene3D - 114 221 - -
Pdy4g00540 243 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 11 231 IPR053218 -
Pdy4g00540 243 SUPERFAMILY NTF2-like 134 219 IPR032710 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00540 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr4:10133399 Pdy5g03252 Pdy-Chr5:85645829 dispersed