Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pdy4g00583 | ATGGCTGCGAATTCAGTTGAGATCGAAAATGTGGAAGAATCAAAAGTTCATGTTTTTTCATCATCGTCGGAGTTGCTTGAGAAGTTGCATCAGAAGTGGAATTCAGTTGATAAGCTGCCCTATCCAGCAATGTATTCTAGTGTTTATGGTGGGATAATTCTTGATCCAGCAATGATGGTCATCCCCATTGATGATCACATGGTGCATCGAGGTCACGGTGTGTTCGATACTGCCATCATTCTTGATGGATACCTCTATGAACTAGATGGTCATATCGATCGAATCCTTCTATCAGCATCAAGAGCAAAAATCTCATCTCCGTTCCCAAAATCAACTCTTCGATCCATTCTTATCCAGCTAACATCAGCATCAAAATGCAAGAAAGGAACTTTAAGATATTGGTTAAGTGCCGGGCCAGGTGACTTCCTACTTTCTCCTTCAGGGTGCCCAACATCCGCCTTCTATGCAGTTGTTATAGACGAAGAATTCTCACAGTGTAAAGAAGGCGTAAAGGTTATAACTTCCACAATCCCCATGAAAGTACCTCTCTTTGCTACAAGCAAAAATGTGAACTACCTCCCGAACATTTTGTCCAAATTAGAAGCAGAAGAGAAAGGTGCATTTGCATCAATATGGATAGATGATGAAGGGTATGTAGCCGAGGGTCCAAATGTGAATGTGGGCTTTGTTACTCATGAAAAAGAGCTTGTTTTGCCTTACTTTGACAAGATATTAAGCGGGTGCACTGCAAAACGGCTTCTTGAGTTAGCTCCAAAGTTGGTGGAAAACGGGCGTTTGAAAAGCATCAAAGTTGGGAATATAACTGTTGAGGAGGCTAAAGAAGCTGCTGAGATGATGTACATTGGAAGCACACTTCCTGTGTTGCCAATTATCGAGTGGGATGAAAAGCCTATAGGCGATGGAAAAGTCGGGGAATTGACGATGGCGTTATCGGACCTCGTTTGGGAAGATATGGTGGCTGGTCCTGAGACACACAGATTGAAAGTTCCTTATTAG | 1017 | 42.58 | MAANSVEIENVEESKVHVFSSSSELLEKLHQKWNSVDKLPYPAMYSSVYGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILDGYLYELDGHIDRILLSASRAKISSPFPKSTLRSILIQLTSASKCKKGTLRYWLSAGPGDFLLSPSGCPTSAFYAVVIDEEFSQCKEGVKVITSTIPMKVPLFATSKNVNYLPNILSKLEAEEKGAFASIWIDDEGYVAEGPNVNVGFVTHEKELVLPYFDKILSGCTAKRLLELAPKLVENGRLKSIKVGNITVEEAKEAAEMMYIGSTLPVLPIIEWDEKPIGDGKVGELTMALSDLVWEDMVAGPETHRLKVPY | 338 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pdy4g00583 | 338 | Gene3D | - | 21 | 160 | IPR043131 | - | |
| Pdy4g00583 | 338 | SUPERFAMILY | D-aminoacid aminotransferase-like PLP-dependent enzymes | 49 | 326 | IPR036038 | GO:0003824(InterPro) | |
| Pdy4g00583 | 338 | Pfam | Amino-transferase class IV | 73 | 300 | IPR001544 | GO:0003824(InterPro) | |
| Pdy4g00583 | 338 | Gene3D | - | 161 | 329 | IPR043132 | - | |
| Pdy4g00583 | 338 | FunFam | D-amino-acid transaminase, chloroplastic | 21 | 159 | - | - | |
| Pdy4g00583 | 338 | PANTHER | AMINO-ACID AMINOTRANSFERASE | 34 | 329 | IPR050571 | GO:0019752(PANTHER) | |
| Pdy4g00583 | 338 | FunFam | D-alanine aminotransferase | 161 | 328 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pdy4g00583 | K18482 | 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Pdy | Pdy-Chr3:58925561 | Pdy4g00583 | Pdy-Chr4:10866377 | dispersed |