AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pdy4g00583 ATGGCTGCGAATTCAGTTGAGATCGAAAATGTGGAAGAATCAAAAGTTCATGTTTTTTCATCATCGTCGGAGTTGCTTGAGAAGTTGCATCAGAAGTGGAATTCAGTTGATAAGCTGCCCTATCCAGCAATGTATTCTAGTGTTTATGGTGGGATAATTCTTGATCCAGCAATGATGGTCATCCCCATTGATGATCACATGGTGCATCGAGGTCACGGTGTGTTCGATACTGCCATCATTCTTGATGGATACCTCTATGAACTAGATGGTCATATCGATCGAATCCTTCTATCAGCATCAAGAGCAAAAATCTCATCTCCGTTCCCAAAATCAACTCTTCGATCCATTCTTATCCAGCTAACATCAGCATCAAAATGCAAGAAAGGAACTTTAAGATATTGGTTAAGTGCCGGGCCAGGTGACTTCCTACTTTCTCCTTCAGGGTGCCCAACATCCGCCTTCTATGCAGTTGTTATAGACGAAGAATTCTCACAGTGTAAAGAAGGCGTAAAGGTTATAACTTCCACAATCCCCATGAAAGTACCTCTCTTTGCTACAAGCAAAAATGTGAACTACCTCCCGAACATTTTGTCCAAATTAGAAGCAGAAGAGAAAGGTGCATTTGCATCAATATGGATAGATGATGAAGGGTATGTAGCCGAGGGTCCAAATGTGAATGTGGGCTTTGTTACTCATGAAAAAGAGCTTGTTTTGCCTTACTTTGACAAGATATTAAGCGGGTGCACTGCAAAACGGCTTCTTGAGTTAGCTCCAAAGTTGGTGGAAAACGGGCGTTTGAAAAGCATCAAAGTTGGGAATATAACTGTTGAGGAGGCTAAAGAAGCTGCTGAGATGATGTACATTGGAAGCACACTTCCTGTGTTGCCAATTATCGAGTGGGATGAAAAGCCTATAGGCGATGGAAAAGTCGGGGAATTGACGATGGCGTTATCGGACCTCGTTTGGGAAGATATGGTGGCTGGTCCTGAGACACACAGATTGAAAGTTCCTTATTAG 1017 42.58 MAANSVEIENVEESKVHVFSSSSELLEKLHQKWNSVDKLPYPAMYSSVYGGIILDPAMMVIPIDDHMVHRGHGVFDTAIILDGYLYELDGHIDRILLSASRAKISSPFPKSTLRSILIQLTSASKCKKGTLRYWLSAGPGDFLLSPSGCPTSAFYAVVIDEEFSQCKEGVKVITSTIPMKVPLFATSKNVNYLPNILSKLEAEEKGAFASIWIDDEGYVAEGPNVNVGFVTHEKELVLPYFDKILSGCTAKRLLELAPKLVENGRLKSIKVGNITVEEAKEAAEMMYIGSTLPVLPIIEWDEKPIGDGKVGELTMALSDLVWEDMVAGPETHRLKVPY 338
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pdy4g00583 338 Gene3D - 21 160 IPR043131 -
Pdy4g00583 338 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 49 326 IPR036038 GO:0003824(InterPro)
Pdy4g00583 338 Pfam Amino-transferase class IV 73 300 IPR001544 GO:0003824(InterPro)
Pdy4g00583 338 Gene3D - 161 329 IPR043132 -
Pdy4g00583 338 FunFam D-amino-acid transaminase, chloroplastic 21 159 - -
Pdy4g00583 338 PANTHER AMINO-ACID AMINOTRANSFERASE 34 329 IPR050571 GO:0019752(PANTHER)
Pdy4g00583 338 FunFam D-alanine aminotransferase 161 328 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pdy4g00583 K18482 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Pdy Pdy-Chr3:58925561 Pdy4g00583 Pdy-Chr4:10866377 dispersed